Paramuribaculum intestinale: NF347_07425
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Entry
NF347_07425 CDS
T09294
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pii
Paramuribaculum intestinale
Pathway
pii00220
Arginine biosynthesis
pii00240
Pyrimidine metabolism
pii00250
Alanine, aspartate and glutamate metabolism
pii01100
Metabolic pathways
pii01110
Biosynthesis of secondary metabolites
pii01240
Biosynthesis of cofactors
Module
pii_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pii00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NF347_07425 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NF347_07425 (carB)
00220 Arginine biosynthesis
NF347_07425 (carB)
Enzymes [BR:
pii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NF347_07425 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
RimK
GARS_A
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WLT40831
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Position
1656808..1660044
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AA seq
1078 aa
AA seq
DB search
MTDHKNQKIKKALLLGSGALKIGEAGEFDYSGSQALKAMKEEGITTVLINPNIATVQTSE
GFADKIYFLPVTPYFVEKVIEKERPDGILLAFGGQTALNCGVALFESGVLERYGVEVLGT
PVQAIMDTEDRELFVHKLDEIGVKTIKSEAVNTIDDARAAAARLGYPVIVRAAYALGGLG
SGFCDNEEQLVSLTEKALSFSPQVLVEKSLKGWKEVEYEVVRDRFDNCITVCNMENFDPL
GIHTGESIVVAPSQTLTNEDYHYLRQLAIKIIRHIGIVGECNVQYAFDPASMDYRVIEVN
ARLSRSSALASKATGYPLAFVAAKLGLGYGLFDLKNSVTKETSAFFEPALDYIVCKIPRW
DLGKFHGVRREIGSSMKSVGEVMAIGRTFEEAIQKGLRMIGQGMHGFTGNRELSIADIDH
ALAEPTDKRIFVIAQAMMKGYSVERIHELTKIDRWFLHRLANIVSTSDELSLCDKLENIS
EPLLRQAKQQGFSDFQIARCVLKDSMADPENNILQVRELRKRLGITPVVKQIDTLAAEYP
ASTNYLYLTYNGTENDVNYLHDHRSIVVLGSGAYRIGSSVEFDWCSVNALLTVKKEGWRS
VMINYNPETVSTDYDLCDRLYFDELTFERVMDILDLEQPHGVILSVGGQIPNNLATRLDD
QHVNILGTSARSIDNAEDRNKFSAMLDRIGVDQPRWRELTSFEDIYQFIDEVGYPVLVRP
SYVLSGAAMNVCSNSDELERFLRLAANVSKKHPVVVSEFIQNAKEIEMDAVAQNGEIKIY
AISEHIEYAGVHSGDATIQFPPQKLYVETIRRLKKVASAIAKALDISGPFNIQFLAKNND
IKVIECNLRASRSFPFVSKVLKLNFIDIATKVMLGIPVEKPAKSAFDLDYVGIKASQFSF
SRLQGADPVLGVDMSSTGEVGCLGDDSSDALLKAMLSVGNRIPSKGILLSTGGPKQKAAM
LDAAHKLNNKGYKIYATGGTHAFLNDNGIPAVKVYWPSQADMQPQALELLHNHEIDLVVN
IPKNLTPTELGNGHTIRRAAIDLNIPLLTNARLASAFIDAFTSMTLDQIEIKSWDEYK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccacaagaaccaaaaaataaaaaaagcccttctgctgggctccggagcactc
aagatcggagaagccggcgaatttgactactcgggatcgcaggctctcaaagcaatgaag
gaagagggcatcaccactgtcctcatcaaccccaacatcgccaccgtacagacctccgaa
ggattcgccgacaagatctacttcctccccgtcacaccctacttcgttgagaaagtcatc
gaaaaagaacgccccgacggcatactgctcgcattcggcggacagaccgcactcaactgc
ggagtggcactcttcgagagcggggtgctcgaacgctacggagtagaagtgctcggaacc
cccgtacaggccatcatggacaccgaggaccgcgaactcttcgtccataagctcgacgag
atcggggtcaagaccatcaagagcgaggccgtcaacaccatcgacgacgcacgcgcggca
gcagcgcgcctcggctaccccgtcattgtccgcgcggcctacgccctcggcggactcgga
tcgggattctgcgacaacgaggagcagctcgtcagcctcaccgaaaaagcactctccttc
tcaccccaggtgctcgtggagaaatcgctcaaaggatggaaagaggtcgaatacgaagtg
gtccgcgaccggttcgacaactgcatcaccgtctgcaacatggaaaacttcgacccgctc
ggcatacacaccggcgaatcaatcgtcgtagcaccctcgcagacactcaccaacgaagac
taccactacctgcgccagctcgccatcaagatcatacgccatatcggcatcgtcggcgaa
tgcaacgtgcagtatgccttcgaccccgcatcgatggactaccgcgtcatcgaggtcaac
gcccggttgagccggtcttcggcactcgcatcgaaagccaccggatatcctctggcattc
gtcgccgccaaactcggactcggatacggactcttcgaccttaagaactccgtcaccaag
gagacatccgcattcttcgagccggcgctcgactatatcgtctgcaagataccccgctgg
gacctcggcaaattccacggcgtacgccgcgagatcggatcgtccatgaaatccgtcggc
gaagtcatggccatcggacgaacattcgaggaagccatacagaaaggcctacgcatgatc
ggacagggcatgcacggattcaccggcaaccgcgaactctccatagccgacatcgaccat
gcactcgccgagccgaccgacaaacgcatcttcgtcatcgcacaggccatgatgaaaggc
tacagcgtcgaacgcatacacgaactcacaaagatcgaccgctggttcctccaccgtctg
gccaacatcgtcagcacatccgacgaactcagcctctgcgacaagctcgaaaacatctcc
gagccgcttctccgccaggccaagcagcagggattctccgacttccagatagcacgctgc
gtgctcaaggactccatggccgatcccgaaaacaatatacttcaggtgagagaactgcgc
aaacggctcggcatcacccctgtcgtcaagcagatcgacacgctcgccgccgaatatccc
gcaagcaccaactacctctacctcacatacaacggcaccgaaaacgacgtcaactatctc
cacgaccaccggtcgatcgtagtcctcggatcgggagcctaccgcatcggcagctccgtg
gagttcgactggtgctcggtcaacgcacttctcaccgtcaagaaagaaggctggcgatcg
gtgatgatcaactacaaccccgaaaccgtatcgaccgactacgacctctgcgaccgcctc
tacttcgacgagctgacattcgagcgtgtcatggacatactcgaccttgagcagccccac
ggagtcatcctctcggtgggaggacagatacccaacaacctcgccacacgcctcgacgac
cagcacgtcaacatactcggcacatcggcgcgcagcatcgacaacgccgaggaccgcaac
aagttctccgcaatgctcgaccgcatcggagtcgatcagccgcgctggcgtgagctgacg
agcttcgaggatatctaccagtttatcgacgaagttggctatccggtgctcgtgcgcccg
agctacgtgctttcgggagccgctatgaacgtctgctccaactccgacgagcttgaacgc
ttcctgcgtctggctgccaacgtttcgaagaagcaccccgtagtggtcagcgagttcata
caaaacgccaaggagatcgagatggatgccgtggcacagaacggagagatcaagatctac
gccatatccgagcatatcgaatatgccggcgtacactccggcgacgccaccatacagttc
ccgccgcagaaactctacgtcgaaaccatacgccgtcttaagaaagtggcctcggccata
gccaaagccctcgacatatccggcccgttcaatatccagttcctggctaagaacaacgac
atcaaagtcatcgagtgcaatctgcgcgcatcgcgcagcttccccttcgtatcgaaggtg
ttgaaactcaacttcatcgacatagccaccaaggtgatgctcggcattcccgtcgaaaaa
cccgcgaagagcgcattcgacctcgactacgtaggcatcaaggcctcgcagttcagcttc
tcacgcctgcagggagccgacccggtgctcggagtcgacatgtcgtcgaccggcgaagtc
ggctgtctgggcgacgattcgtccgacgcgctgctcaaggccatgctctccgtcggcaac
cgcatcccctcaaagggaatactcctctccaccggcggacccaagcagaaggccgcaatg
ctcgacgccgcacacaaactcaacaacaagggctacaagatctacgccacaggaggcaca
cacgccttcctcaacgacaacggcatacccgccgtaaaggtctactggcccagtcaggcc
gacatgcagccgcaggcactcgaactgctccacaaccatgagattgatctcgtggtaaac
atccccaagaacctcacacccaccgaactgggcaacggacacacgatacgccgcgcggca
atcgacctcaacataccgctgctcaccaacgcccgcctggcatcggcattcatcgacgca
ttcacatcgatgacactcgaccagatcgagatcaagtcgtgggacgagtataaatga
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