KEGG   Paramuribaculum intestinale: NF347_08480
Entry
NF347_08480       CDS       T09294                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pii  Paramuribaculum intestinale
Pathway
pii03030  DNA replication
pii03410  Base excision repair
pii03420  Nucleotide excision repair
pii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NF347_08480 (polA)
   03410 Base excision repair
    NF347_08480 (polA)
   03420 Nucleotide excision repair
    NF347_08480 (polA)
   03440 Homologous recombination
    NF347_08480 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pii03032]
    NF347_08480 (polA)
   03400 DNA repair and recombination proteins [BR:pii03400]
    NF347_08480 (polA)
Enzymes [BR:pii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NF347_08480 (polA)
DNA replication proteins [BR:pii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NF347_08480 (polA)
DNA repair and recombination proteins [BR:pii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NF347_08480 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NF347_08480 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 HHH_5 FGAR-AT_PurM_N-like
Other DBs
NCBI-ProteinID: WLT41026
LinkDB
Position
1905748..1908519
AA seq 923 aa
MMHQRLFLLDAYALIYRAYYAMIRSPRITSKGFNTSAIFGFVNTLNEVLNKEQPTHIAVC
FDPAGPTFRHEAYEDYKAQREKQPEDITLSVPWIKEILQAMHIPVVEVPGYEADDVIGTL
SAIAEREGFDTYMMTPDKDYGQLVTDHVKMYRPSLRGEGFEIRGPEEVCARYGIERPSQV
IDLLALEGDTSDNIPGCPGIGEKTAAKLIQAYGSVENLIANSGQLTGATRKRVEDNKEQI
EFSKFLATIKTDVPLPEDITPQAMTRSEPDYQTLAEIYRKLEFRTFIKRMESAGQLAAPH
PAEPAADGFVGSLFDEPAEQSASNLTTTPHNYTCITDNKTLQTAVDEALTNISPIGITVY
APGESAMSAPWLGIAVSPAEGKAFYAVVPAENTDKATRKEFFGLISRLAASPATIISHDV
KRAMIVLRRHGIRLTDNYYDTSLAHYLIDPETTHRIAGLAFRYLKYNMAEQPDDRTGLKR
FQPIAPQEAATVMCEHADITLRLYSLLNGEVENQGLMPLLNDIELPLVKVLAEMEYTGVR
IDSDVLDDMSVRFTKRLDEMETEIFRLAGERFNLASPMQVGRMLFEKLQIDSNGKRTKKG
GYSTTEEILEKLRPTHAIVDLILRHRALKKLLTTYVNALPGMVNRHTGKIHTSYNQTVTA
TGRISSANPNLQNIPIRSDDGREIRSAFVADPGDIIMSADYSQIELRLIADLSGDPDMIE
AFGSGEDIHRATAAKIYHVAPSDVSDTQRRNAKTANFGIIYGISAFGLSERLGIPRSEAR
DLIEGYFATYPRIRAYMEENVDGARRNGYVTTVMGRKRFLPEINSRNATVRNYAERNAVN
APIQGSAADIIKRAMVDIYHAIGEAGLKSRMIMQVHDELVFNVIPDELPQLQEIVCRLME
QAYVGRVRLEVAAGSGRTWLEAH
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgatgcaccaacgactattcctgctcgacgcctacgcgctcatataccgtgcctactat
gctatgatacgctctccgcgtatcacatccaaagggttcaacacatccgccatattcgga
ttcgtgaacacactcaacgaggtgcttaacaaggagcagcccacacatatagccgtgtgc
ttcgatccggccggaccgacattccgccatgaggcatacgaagactacaaggcccagcgc
gagaaacagccagaagacataactctttcagtaccttggatcaaagagatactgcaggcg
atgcacataccggtcgtggaagtgccgggctacgaggctgacgacgtcatcggcacactc
agcgccattgccgagcgtgaaggcttcgatacatacatgatgacgcccgacaaggactac
ggccagctggtcaccgatcacgtgaagatgtatcgtccgtcattgcggggcgaaggattc
gagatcagaggacccgaagaggtgtgcgcgcgctatggcatagaacgcccgtcgcaggtc
atcgatctgcttgcgctcgaaggagatacatccgacaacatcccgggatgccccggcata
ggagaaaagactgccgcaaagctcatacaagcctatggatccgtggaaaatctgatagcc
aacagcgggcaactgaccggagccacccgcaagcgagtggaggataacaaggaacagatc
gaattctcgaagtttctcgcaacgataaagaccgacgtgccactgcccgaggatatcacc
ccgcaggccatgacacgctccgaacccgactatcagactcttgccgaaatataccgcaag
ctcgaattccgcacattcatcaaacgcatggagagcgccggacaactcgctgccccacac
cccgccgaacctgctgccgacggttttgtaggatcactgttcgacgagcccgccgagcaa
tcagcctccaatctcaccaccacaccccacaactacacctgcatcactgacaacaagaca
ttgcagactgccgtcgacgaagcgctgacaaacatttcacccatagggatcacagtctat
gcaccgggcgaaagtgccatgagcgccccatggctcggcatcgcagtctctccggcggag
ggcaaggccttctacgctgtcgtgcccgccgaaaacacggataaagccacacgcaaagag
tttttcgggcttatcagccgtctggcagcctcaccggccaccataatcagccacgatgtg
aagcgggctatgatagtgctgcgccggcatggcatacgcctgaccgacaactactacgac
acctcgctggcacattacctgatagatccggaaacaacccaccgcattgccggactggca
ttcagataccttaagtacaacatggccgagcagcccgacgaccgcaccgggctaaaacgc
ttccagcccatcgcgcctcaggaggccgcaacagtgatgtgtgagcacgccgacattacg
ctgcgtctgtacagcctgctcaacggcgaagtcgaaaaccagggactcatgccgcttcta
aacgacattgaactaccactcgtcaaggtgctcgccgaaatggaatataccggcgtgaga
atcgacagcgacgtactcgacgatatgtcggtaaggttcaccaagcgccttgacgaaatg
gaaacggagatattccgcctggccggcgaacgcttcaatcttgcttcgccgatgcaggta
ggacgcatgttgtttgaaaaactacagatcgacagcaacggcaagcgcactaaaaaaggg
ggctactccactactgaagagatcctggaaaaactccggcccacccatgccatcgtggat
ctgatattgcgccaccgcgcactgaaaaaactgctgaccacctacgtcaacgcattgccc
ggcatggtcaaccgccacactggcaagatacacacatcctacaaccagaccgtcactgcc
acgggccgcatatcatcggccaacccgaatctgcagaacatccccataagatctgacgac
ggccgcgagatcagaagcgctttcgtagctgatccgggcgacatcatcatgagcgccgac
tactcccagatagaattaagactcatagccgaccttagcggcgatcccgacatgatagag
gcgttcggctcgggcgaggatatacaccgggcgacggccgcaaaaatataccacgtggca
ccctccgatgtcagcgacacacagcgccgcaacgccaaaacagccaatttcgggatcatc
tacggcatatcggcattcggcctgtcggaacggctcggcataccgcgatccgaagcacgc
gatctgattgaagggtattttgccacctacccgcgcatacgcgcatacatggaagagaat
gttgacggcgcacgccgcaatggatacgtgactaccgtgatgggacgcaaacgcttcctg
cccgagatcaacagccgcaacgctaccgtcagaaactacgccgaacgcaatgccgtcaat
gccccgatacaaggatcggccgccgacataatcaaacgcgccatggtcgacatttaccac
gctatcggagaagccggcctgaaatcgagaatgatcatgcaggtgcatgacgaactggtg
ttcaatgtaatccccgacgaactgccgcagctgcaggaaatcgtatgccggcttatggaa
caagcctacgtaggccgcgtgcgcctggaagtggcggcaggcagcggacgcacatggctc
gaggctcactga

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