Paramuribaculum intestinale: NF347_09275
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Entry
NF347_09275 CDS
T09294
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pii
Paramuribaculum intestinale
Pathway
pii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NF347_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pii03400
]
NF347_09275
DNA repair and recombination proteins [BR:
pii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NF347_09275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Motif
Other DBs
NCBI-ProteinID:
WLT41175
LinkDB
All DBs
Position
complement(2045430..2047892)
Genome browser
AA seq
820 aa
AA seq
DB search
MIYPDRFEHKIGFTAVRQRVAELCACDASRAMVEAMAFSASADEVRARLQPAHEMLRLLR
AGEMPPLDGLGNPDEVLKAIRLPGTFAPAAEMLSLRRALAVVADTADFFAARRDEEGRSP
LPALDAIACRIGTVRNEAAAIDRVMDRYGEILDNASPELAAIRRQLSAMSGSVNSAMRRV
MARAVADGVLEADAAPAMRDGRLVIPVAPMNKRRISGIVHDESASGKTVFIEPAEVVEAN
NRIRELQMEERREITRILIRLADGLRPSIPLIEESVEVVARLDFVRAKARYAVETDACMP
SLSDGPELEWYHACHPELLLSLRRQGREIVPLDIVLTPGARLLVISGPNAGGKSVCLKTV
GVLQYMLQCGLLPPVHDNSHFGIFSDIFVDIGDDQSIEDDLSTYSSHLRNMKTIVGNGRP
GSLVLIDEFGGGTEPQIGGAIAQAILHRFVDLGLWGVVTTHYQNLKHFAEDTDGLVNGSM
LYDRHLMQPLFRLSIGNPGSSFAVEIARKTGLPQEIIREAEEIVGSDYVNLDKYLLDIAR
DRKYWENKRMAIRQKEKKLEETLRRYEEEAETLRSQRREIIGEARQEARKILEGSNAAIE
RTIRTIREAQADRERTQEARRKLEQERRQMESAKGVGSGGNELLRRAPKAKKPKPEAPPA
GAASRPIAVGDAVKLDGEGTPGRVLEVSGKRATVVFGMLKTTVDTARLRHTAADPDRAPS
RPASFVSTATADDLRDRQLSFKRDIDVRGMRVDEALQAITYFIDDAVQFSAGRVRILHGT
GTGALRQAIRRYLDTVAGVASYRDEHVQFGGTGITVVDLA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgatataccccgatagattcgaacacaagataggatttacggccgtacgccagcgtgtg
gccgagctgtgtgcctgcgatgcctcgcgtgccatggtcgaggctatggcattctcggct
tcggccgatgaggtgcgtgcccgtctgcagcctgcccacgagatgctgcgcctgctccgc
gccggcgagatgccgccgctcgacgggctcggaaatccggacgaggtgctcaaggccata
cgcctgccgggcacgtttgcgccggcggccgagatgctgtcgctccgcagggcgcttgcc
gtagtggccgatacggccgatttcttcgccgccaggcgcgacgaggaggggcgatcgccc
ctccctgcgctcgatgccatcgcatgccggataggcaccgtcagaaacgaggctgcggcg
atcgaccgtgtgatggaccgctacggggagattctcgacaatgcttcgccggagctggcg
gccatacgacggcagttgtcggcaatgtcggggtcggtcaactcggccatgcgaagggtc
atggccagggcggtggccgacggggtgttggaggccgatgcggctccggccatgcgcgac
ggacgtctggtcatacctgtcgcgccgatgaacaagcgacgtatctcaggcatagtccac
gatgagagtgcctcgggcaagacggtgttcatagagccggccgaggtggtggaggccaac
aaccgcatacgggagctgcagatggaggagcgccgcgagatcacacgcatactcatccgt
ctggccgacgggctgaggccgtcgatacccttgatcgaggagtcggtcgaggtggtggca
aggctcgatttcgtgagagccaaggcgcgctacgcggtagagaccgacgcctgtatgccg
tcgctctccgacgggccggaactggaatggtatcatgcgtgtcatcccgaactgctgctg
tcgctgcggcgtcaggggcgcgagattgtgccgctcgacattgtgctgactcccggagcg
cgtctgctggtgatatcgggacccaacgcgggcggcaagtcggtgtgtctgaagacggtc
ggagtgttgcagtacatgctgcagtgcggactgcttccgccggttcacgacaattcgcat
ttcggcattttctccgacatcttcgtggatatcggcgacgaccagtcgatagaggacgat
ctgtcgacctacagttcgcatctgcgcaacatgaagaccatcgtcggcaacggacgaccc
ggatcgctggtgctcatcgacgagttcggagggggcacagagccgcagatcggaggagcg
atcgcacaggcgatactccaccgcttcgtcgatctcggactttggggcgtggtgaccacc
cattatcagaatctcaagcacttcgccgaggataccgacgggcttgtcaacggctcgatg
ctctacgaccgtcatctgatgcagccgctgttcaggctctctatcggcaatcccggcagc
tcgttcgctgtggagatcgcgcgcaagaccggactgccgcaggagatcatccgcgaagcc
gaggagatagtgggcagcgactatgtgaatctcgacaaatatctgctcgatattgcgcgc
gacagaaaatactgggaaaacaagcgcatggccatccgccagaaggagaagaagcttgag
gaaaccctgaggcgttacgaggaggaggccgaaacgctccgctcgcagcggcgcgagatc
attggcgaggcgcgtcaggaggccagaaagatactcgaaggaagcaatgcggccatagag
cgcaccatacgcacgatccgcgaggcgcaggccgacagggaacggacgcaggaggctcgc
cgcaagcttgagcaggagcgacgtcagatggagtcggccaagggcgtcggatcgggcggc
aacgagctgctgcggcgagcgccaaaggctaagaagccgaagcctgaggctccgccggcc
ggcgctgcctcgcggccgatagccgtgggcgacgccgtgaagctcgatggagagggcacg
cccggacgtgtgctcgaagtgtcgggaaagcgtgccacggtggtgttcggtatgcttaag
accacggtcgacacggcgcgtctgcgccacacggcggccgatcccgaccgcgccccgtca
cgcccggcgtcgttcgtcagcaccgccacggccgacgatctccgcgaccgtcagctcagc
ttcaagcgcgacatcgatgtcaggggaatgcgtgtcgacgaggcgctccaggccataacc
tactttatcgacgatgcagtgcagttctcggccggacgggtgcgcatactccacggcacc
ggcaccggagcgttgcgtcaggccatacgccgctatctcgacactgtggccggagtggct
tcgtaccgcgatgagcacgtgcagtttggcggcaccggcatcacggtggtggatctcgcc
tga
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