Paramuribaculum intestinale: NF347_11120
Help
Entry
NF347_11120 CDS
T09294
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pii
Paramuribaculum intestinale
Pathway
pii03410
Base excision repair
pii03430
Mismatch repair
pii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF347_11120 (recJ)
03430 Mismatch repair
NF347_11120 (recJ)
03440 Homologous recombination
NF347_11120 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pii03400
]
NF347_11120 (recJ)
DNA repair and recombination proteins [BR:
pii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NF347_11120 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NF347_11120 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NF347_11120 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WLT41511
LinkDB
All DBs
Position
2483550..2485277
Genome browser
AA seq
575 aa
AA seq
DB search
MTSKWNYSTLSSEEQSYESRLSKRYAACPPISRLLVQRGITSVEEAEHFFHPSLKDLHDP
FLMPDMDKAVARLNKAMGAKERIMVYGDYDVDGTTAVALVYRYLRNFYSNVEYYIPTRYD
EGYGISKRSIDYAASQGVSLVIILDCGIKAIDEIDYARSLGIDFIICDHHVPDDRLPDAV
AILNPKLEGSTYPCSHLSGCGVGYKFMQAFAISNGIPGAELEGMLDLVAVSIAADIVPMV
DENRIMAYHGLRRLNSNPNLGLRAIIRICGLSGREITISDVIFKIGPRINASGRMQSGRE
AVDLLVARDSAEAHEKGKEIDRYNQDRKELDKRITEEANAILEARGEDCSDKKSIVIYNK
DWHRGIIGIVASRLTELYYKPAVVLTLNNGMATGSSRSVQGFDVYKAVEATRDILENFGG
HTYAVGLSLKEENIPEFTRRFEEYVSANIQPNQLTPLLDIDAQITFAQITSEFVATLRRF
NPFGPGNQKPVFCARSVMDFGTSKLVGKNLEHIKLELVDDTSGKVFNCIAFNMAQHFDYI
HSRRPFDIAFTIEDNKHQAAAGAIQLLIKEIRIPE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaaatggaactattcaaccctttcgtcagaagagcagagctacgagtcacga
ctctctaagcgctacgcagcttgtccgccgataagccgtctgcttgtgcagcgcggcatc
acgtcggtcgaggaagcggaacatttcttccatccatcgctcaaggatcttcacgatccg
ttccttatgccggacatggacaaagccgtggcccggctcaacaaggccatgggggcgaaa
gagaggataatggtctacggcgactacgacgtggacggcaccaccgccgtggcgctcgtc
taccgctatctgcgcaacttctattccaacgttgaatactacatcccgacacgctacgac
gaaggctacgggatttcgaagcgtagcatcgactacgcagcctcgcagggcgtaagcctt
gtgataatacttgactgcggcatcaaggccatagacgagatcgactatgcccgcagtctc
ggcatcgacttcataatctgcgaccaccacgtgcccgacgaccgtctgcccgacgccgtg
gccatactcaatcccaagctcgaagggagcacatatccgtgctcacacctgtcgggatgc
ggagtgggctacaagttcatgcaggccttcgcgatttccaacggcatccccggagccgaa
ctcgaagggatgctcgacctggtggctgtcagcattgccgccgacatcgtgccgatggtc
gacgaaaaccgtatcatggcctatcacggcctgcgccgtctcaactccaatcccaacctc
ggactcagagcgataatacgcatctgcggtctgagcgggcgtgagatcaccatctccgac
gtgatcttcaagatcggcccccgcatcaacgcctccggacgcatgcagagcggacgtgag
gccgtggatctgcttgtggcccgcgactccgccgaagcgcacgaaaaagggaaggagatc
gaccgctacaatcaggaccgcaaggagctcgacaaacgtatcaccgaagaggccaacgcc
atactcgaggcccgcggcgaggactgctccgacaagaaatcgatcgtcatctacaacaaa
gactggcatcgtggcatcataggcatcgtggcctcgcgccttacagaactctattacaag
cccgcagtggtgctgaccctcaacaacggcatggccaccggctcgtcgcgctcggtgcag
ggctttgacgtctacaaagccgtagaagccacccgcgacatactcgagaacttcggaggc
cacacctatgctgtcggcctgtcgctgaaagaggagaacataccggaattcacacgccgg
tttgaggaatacgtatcggccaacatacagcccaaccagctcactcccctgcttgacatc
gacgcacagatcacattcgcgcagatcaccagcgagtttgtggcaacactgcggcgtttc
aacccgttcgggccgggcaaccagaaaccggtgttctgcgcccgctctgtgatggatttc
ggcacgagcaagcttgttggcaaaaacctcgagcacataaaactcgaacttgtcgacgac
acctcgggcaaggtgttcaactgtatcgccttcaacatggcgcaacacttcgactacatc
cactcgcggcgtccgtttgacatagccttcaccatcgaggacaacaagcatcaggcagcc
gccggagccatacagctactgatcaaggaaatccgcattcccgaatga
DBGET
integrated database retrieval system
