Pigmentibacter sp. JX0631: QEJ31_00935
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Entry
QEJ31_00935 CDS
T08995
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pij
Pigmentibacter sp. JX0631
Pathway
pij03030
DNA replication
pij03410
Base excision repair
pij03420
Nucleotide excision repair
pij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QEJ31_00935 (polA)
03410 Base excision repair
QEJ31_00935 (polA)
03420 Nucleotide excision repair
QEJ31_00935 (polA)
03440 Homologous recombination
QEJ31_00935 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pij03032
]
QEJ31_00935 (polA)
03400 DNA repair and recombination proteins [BR:
pij03400
]
QEJ31_00935 (polA)
Enzymes [BR:
pij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QEJ31_00935 (polA)
DNA replication proteins [BR:
pij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QEJ31_00935 (polA)
DNA repair and recombination proteins [BR:
pij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QEJ31_00935 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEJ31_00935 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DUF3600
DEDDh_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WGL60168
LinkDB
All DBs
Position
227253..230114
Genome browser
AA seq
953 aa
AA seq
DB search
MELNTQRLFIIDGMSLLFRSFYAMGSRLTAPDGTPIGAVYGFLKVMLKIFREQNPTHFAI
CWDLKEKTFRHEVFPLYKANRGETPPEIIPQIKIIQKLLKDLDIPTFAIPGYEADDLAGT
LAKFFEHYGAVFLVTSDKDYMQVVNENIQMYSLKKGDEYDIITPEKVNDYFGVPPEKVIE
VLALTGDTIDNIPGAKGIGDKTAAKLIAEFGTVENLLKNIDTIQNKRAKTALENGKDAVI
MSKYLVTIKTDIPLNVSELSLRYTFTELKNHKETRQLLESLRMITLLKSIYGDKPQSIDT
SKSKEKKEEIKSEIKKETSRKNISKNIESIPWEKENYKLILTHKELANIFAKISDPTTLV
IALDTETTGLDIIEDVPIGVSISFEPGQAYYIPAHEEHLSGGTLLTAEKDLPEYSKKEVW
QDLNTALNNRKALLVAHNLKFDMHMLKNVGVELGNNLTCCTMVAAWLTNPAEGGFSLDFL
TLKHYNYQKIPTSALIGKETGRSSMLAVPLSELATYACEDVDATIRLWYYYDQRFQQNIE
LQKLYYDLEMPILLLLCEMERTGVHINSEYLGALTAEVQTTLLKLESDIYKTVGETFKIS
SPKQLGDILFEKLKIHEQLGYKGKLARTTQGYKTDATVLEQFEDHPVVEKVQQYRELSKL
LSTYILVLPKLVKSSTGRVHTHFNQIGTATGRLSSSDPNLQNIPVKTDWGKKVRAAFNAS
KGNYHIISADYSQIELRVLAHISQDKNMLAAFNSGADIHRQTAAQILGKDPSEVTAAERN
SAKAINFGIIYGMGPQRLAKQQKITLTEAKSFIEKYFTNFSGVKKYLDDQRASAHAHAMV
KTYFGRVRPIPAMLSNNPVEAKLAENMAINSPIQGTAADIMKLGMLAVSKNLKSANLKTK
VVIQVHDELVLDGPIEEFKQVNKIVEQAMEKAVNFSVPMLVEIGAGKNWLEAK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatactcaacgcctatttatcatagacggcatgtcgttactttttagatct
ttttatgctatgggttcacgactaacggctcctgatggaacaccaataggcgctgtgtat
ggttttctaaaagtaatgctaaaaatttttcgtgaacaaaaccctacacattttgcaatt
tgttgggatttaaaagaaaaaacatttagacatgaagtttttcctttatataaagcaaat
agaggtgaaactcctcctgaaattattcctcaaatcaaaataatccaaaaattattaaaa
gatttagacatccctacatttgcaattccaggttatgaagctgatgatctagcaggaact
ttagcaaagttttttgaacattacggtgctgtatttcttgttacttctgataaagattac
atgcaagttgttaacgaaaatattcaaatgtattccttaaaaaaaggtgatgaatacgat
attattaccccagaaaaagttaatgactattttggagttcctcccgaaaaagtgattgaa
gttcttgcgcttacaggagatactattgataatatccctggagcaaaaggaattggtgat
aaaacagctgcaaaactcattgctgaatttggaactgttgaaaatttattaaaaaatatt
gacactatacaaaataaacgggctaaaactgcattagaaaacggaaaagatgcagttatt
atgtcgaaatatcttgttactataaaaacagatattcctcttaatgtatctgaattatca
ttacgctatacttttaccgaacttaagaatcataaagaaacaagacaattgcttgaatcg
ctcaggatgattactttgctaaagtctatttatggagataaaccacaatcaatagatact
tcgaaaagtaaagaaaaaaaagaagaaattaaatctgaaattaaaaaagaaacaagtcgg
aaaaatatttctaaaaatatcgaaagtattccgtgggaaaaagaaaattataaattaatc
cttacccacaaagagttagctaatatctttgctaaaatttcagatcctactacactagtg
atcgcattggatactgaaacaactggattagatattattgaagatgttccaattggagta
tcaattagtttcgaacctggtcaagcttattatattcctgcacatgaagagcatttgtct
ggcggaacattacttactgcagagaaagatcttcctgaatattccaaaaaagaagtttgg
caagatttaaacacggcattaaacaatagaaaggcattgttagtagcgcataatttaaaa
ttcgatatgcatatgctgaaaaatgtgggtgttgaacttggaaataatttaacttgctgc
actatggttgctgcttggttaactaatcctgccgaaggtggttttagtttagatttttta
acactcaaacattataattatcaaaaaataccgacatctgcgttaattggaaaagaaaca
ggcagatcttcaatgctagctgttcctttatctgaattggctacttatgcttgtgaagat
gttgatgctactatcagactttggtattattatgatcaacgcttccaacaaaatatagag
ctacaaaaactttattatgatcttgaaatgcccattttattattactttgtgaaatggaa
agaactggtgtgcatatcaattcagaatatttgggtgcattaaccgctgaagtacaaaca
actttgctaaaactagaatcagatatttataaaactgtaggtgaaacgtttaaaatttcc
agcccaaaacaattaggtgatattttatttgaaaaattaaaaattcacgaacaattaggc
tataaaggaaaacttgcacgcacaacacaaggttacaaaacagatgccactgtcttagaa
cagtttgaagatcatcccgttgtagaaaaagttcaacaatatagagagctttctaaacta
ctttccacttatattcttgttttaccaaaattggtgaaatcttctactggtagagttcat
actcatttcaatcaaattggtacagctactgggcgtttatctagttcagatcctaatttg
caaaatattcctgtaaaaactgattggggtaaaaaagtccgtgcagcttttaatgcttca
aaaggaaattatcatattatttctgcggattattctcaaattgaactaagagttctagcg
catatatcgcaagataaaaacatgctcgccgcttttaactcaggagcggacatccatcga
caaactgcagctcaaattcttggaaaagatccctctgaagtaacagctgcagaacggaat
agcgcaaaagcaattaatttcggtatcatttatggcatgggacctcaacgtttggcaaaa
caacaaaaaataactttaaccgaggcaaaaagttttatagaaaaatatttcacaaatttt
tcaggcgtaaaaaaatatttagatgatcaaagagcttccgctcatgcgcacgccatggtc
aaaacctatttcgggagggtcagacctatccctgccatgctttcgaacaatccagttgaa
gcaaaattagcagaaaatatggctattaattctcctattcaaggaactgctgctgatatt
atgaaactaggaatgctagctgtgagtaaaaatttaaaatcagcaaatttaaaaacaaaa
gtagtcattcaagtacatgacgaacttgttttggatggtccaattgaagaatttaaacaa
gtcaataaaattgtagaacaagcaatggaaaaggcagtaaacttttcagtacctatgcta
gttgaaattggagcaggaaaaaactggttggaggcaaagtaa
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