KEGG   Pigmentibacter sp. JX0631: QEJ31_01750
Entry
QEJ31_01750       CDS       T08995                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pij  Pigmentibacter sp. JX0631
Brite
KEGG Orthology (KO) [BR:pij00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pij02044]
    QEJ31_01750 (tssC)
Secretion system [BR:pij02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QEJ31_01750 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WGL60326
LinkDB
Position
415438..416883
AA seq 481 aa
MSTACIELVQNSRMIKDESQLDYAKYIVSSFADEVVNGKFGEIVDCENLIIPLQKRIAEI
DQILTDQINEILHHPEFQKLEASWLGLHKFVCNTETGRTLKIKLLSADKNELLKDIEKAL
DFDQSALFKKVYEEEYGTFGGDPFSLLIGDYFFSKSPKDIALLEGISHVAAAAHAPFISS
CNPNLFEMDCFTEMPNPRDLVSLFETSGFLSWNSFRNNEDSKYVTLTLPRVMQRLPYGKG
YLEVDEFNFEESMNGADHTRYLWGNPAYVLGNRITSAFTKYSWCAAIRGVEGGGLVDNLP
VYTYISPAGDREIKCPTEVIITDRREKELSDLGFIALCYRKNSNQSVFFGGQTVAKVKEY
EDPVATANANIALQLPYILAASRFAHYLKVIMRDKIGSFTSLGEISIFLNNWISHYVLLN
DYASQSVKASYPLREARIDVYEIPGKPGCYRSVCFLRPHYQLNELTVSIRFVSELPPPAA
G
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcaacagcgtgtattgaattagtgcaaaattctcgaatgattaaagatgaaagccaa
cttgattatgcaaaatatatagtttcatcatttgcagatgaagtagttaatggcaaattt
ggtgaaattgtagattgtgaaaatttaattatcccattacaaaaaagaattgcagaaatt
gatcaaatcttaaccgaccaaattaatgaaatactgcatcatcctgaatttcaaaaacta
gaagcttcttggttaggtttacataaatttgtttgcaatactgaaacaggtagaactctt
aagatcaaacttttatcagctgataaaaatgagttactaaaagatattgaaaaagcgcta
gattttgatcaaagcgctctctttaaaaaagtatatgaagaagagtatggtacttttgga
ggcgatcctttttcattactaattggagattatttctttagcaaatctccaaaagatatt
gccttactagagggaatttcacatgttgcagctgctgcacatgctccttttattagttct
tgtaaccctaatttatttgaaatggactgttttacagaaatgccaaatccaagagatctt
gttagtttatttgaaacttcaggttttctctcatggaattcttttcgtaataacgaagat
tctaaatatgtaactttaactttacctagagtaatgcaacgtttaccatatggaaaagga
tatttagaagttgatgaatttaattttgaagaaagcatgaatggcgcagatcatactaga
tacttatggggaaatcctgcatatgtattaggtaacagaattacaagtgcatttacaaag
tatagctggtgtgccgcaattagaggagttgaaggtggaggcttggttgataatttacca
gtttatacctatatttctccagctggtgatagagaaataaaatgcccaacagaagttatt
attactgatagaagagaaaaagaattaagtgatctaggctttattgcattatgttatagg
aaaaattcaaatcaatctgttttctttggtggtcaaacagtcgctaaagtaaaagaatat
gaagatcctgtagccactgcaaatgctaatatagctttgcaacttccatatatccttgct
gcttcaagatttgcacattatcttaaagtgattatgcgcgataaaattggctctttcaca
agcctcggtgaaatttcaatttttctaaataactggatatcacattacgtattattaaat
gattatgcttcacagagcgtaaaagcatcctacccgttacgcgaagcaagaattgatgtg
tatgaaattccaggaaaaccgggctgctaccgctcagtttgtttccttagaccccattac
caattaaatgaactcactgtttcaattcgttttgtttctgaacttccacccccagcagca
ggctaa

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