Pigmentibacter sp. JX0631: QEJ31_05585
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Entry
QEJ31_05585 CDS
T08995
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pij
Pigmentibacter sp. JX0631
Brite
KEGG Orthology (KO) [BR:
pij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pij03032
]
QEJ31_05585
03036 Chromosome and associated proteins [BR:
pij03036
]
QEJ31_05585
03400 DNA repair and recombination proteins [BR:
pij03400
]
QEJ31_05585
DNA replication proteins [BR:
pij03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QEJ31_05585
Chromosome and associated proteins [BR:
pij03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QEJ31_05585
DNA repair and recombination proteins [BR:
pij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QEJ31_05585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF4986
STAS_2
Motif
Other DBs
NCBI-ProteinID:
WGL61065
UniProt:
A0AA95G7D3
LinkDB
All DBs
Position
complement(1296185..1296514)
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AA seq
109 aa
AA seq
DB search
MSKRKVATVSTSALTVEVSSRFDQLPKKLTKEVIAAFLDAIEDHVAAGKKVRIDKLGILQ
VKDRAARKGRNPQTGEEIKIPASKKVSFRVASSLKEKVGVKRKSAKKKR
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaaaagttgcaacagtttctacatctgctttaactgttgaggtttcttca
agatttgatcagttaccaaaaaaattaactaaagaagttatagcagcttttcttgatgcc
attgaagatcatgttgctgcaggtaaaaaagttcgtattgataaactaggtattctacaa
gtaaaggatagagccgcgagaaaaggtcggaatcctcagactggcgaagaaattaaaatt
ccagcttcgaaaaaagttagctttagagttgcctcctctctgaaagaaaaagttggtgtg
aaaagaaaatcagcgaagaaaaaaagataa
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