Pigmentibacter sp. JX0631: QEJ31_09045
Help
Entry
QEJ31_09045 CDS
T08995
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pij
Pigmentibacter sp. JX0631
Pathway
pij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEJ31_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pij03019
]
QEJ31_09045
03009 Ribosome biogenesis [BR:
pij03009
]
QEJ31_09045
Enzymes [BR:
pij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QEJ31_09045
Messenger RNA biogenesis [BR:
pij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QEJ31_09045
Ribosome biogenesis [BR:
pij03009
]
Prokaryotic type
rRNA helicases
QEJ31_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
PhoH
AAA_22
C2_C2CD3_N
Motif
Other DBs
NCBI-ProteinID:
WGL58676
LinkDB
All DBs
Position
2071149..2072549
Genome browser
AA seq
466 aa
AA seq
DB search
MINIDKYLKLMNLTKLTAIQEKCIEPIYNAESVFALAPTGSGKTMAFLLPLLLKLDTSIR
SPQVIILVPTRELGMQIANVAQNIANCLFEAEQKNILIRSVFGGTAISAQILEMQKNPHV
IIATPGRMIDLLQRESIETNQLKTLILDEADIMVGMGFADQIEEIVNYVPSHLQIGFFSA
TQNEKITELEKLFLRNVKFVKIDLREKIVSSDKNSIKHEYLVTKKDEKKDKLIQILSAEH
FNKGIIFCHTRETVQNLVTEMKQHGLNIDGLTGELGQVHRNSIMRNFKTGNLKFLVATNI
AARGIDVSLLPIVIHFDIPYQNDEYVHRSGRTGRAGHSGLSLALCEEKNVNYYLNMMKEL
QLDCSEFKKDSVFKKIQKEEIKQAEKVKNDIKFIKVFINKGKREKIRPVDIVGSFIKELN
LEKEDIGNIFIFDHFTHVEINSKKYLEKRGIKVKIKNMLASVTIAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgataaatattgataagtatttgaaattaatgaacttaaccaagttgactgcaattcag
gaaaagtgcatagaacctatttacaatgcagaatctgtttttgccctagctccgactggt
tctggtaaaactatggcgtttctcttgccgctattattaaaattagatacttcgatacgc
tcaccacaagttatcattctagttcctactagagaattaggtatgcaaattgccaatgta
gctcaaaatatagctaattgtttgtttgaagccgagcaaaaaaatatcttgatccgttct
gtttttgggggaaccgcaatttcagctcaaatattagaaatgcaaaaaaatccacatgtt
attattgccactccaggaagaatgatagatttattgcaacgtgaatctatagaaactaac
cagcttaaaaccttaatcttagatgaagctgatataatggttggtatgggttttgcagat
caaattgaagaaatagtaaattacgtaccaagtcatctgcaaattggttttttctcagct
acacaaaatgagaaaataactgagctagaaaaactatttttaaggaatgtgaaatttgtt
aaaattgatttaagagaaaaaatagttagcagtgataaaaattcaattaaacacgaatat
ttagttacaaaaaaagatgaaaaaaaagataaactaattcaaattttgtctgcagaacat
tttaataaaggtattatcttttgccacactcgagaaaccgtgcaaaatttagtaactgaa
atgaagcaacatggtttaaatattgatggtttgactggtgagttggggcaagttcataga
aacagtatcatgcgcaatttcaaaactggaaatttaaaatttctggtcgcaacaaatatt
gctgccagaggcattgatgtttctttgctgccaatagtaattcattttgatatcccatac
caaaatgacgagtatgtccatcgatctggtagaacaggaagagctgggcattcgggttta
tctctcgctctctgcgaagaaaaaaatgtaaattactatttaaatatgatgaaagaattg
caattagattgctcagaatttaaaaaagatagcgtatttaaaaaaattcaaaaagaagaa
attaagcaagcagaaaaagttaaaaatgatattaaatttattaaagtatttataaataaa
ggtaaaagagaaaaaattagacctgtagatatcgttggttcatttattaaagaacttaat
ttagaaaaagaagatataggtaatatatttatttttgatcattttactcatgttgaaata
aattctaaaaaatatttagaaaaaagagggataaaagttaaaataaaaaatatgttagca
agtgttactattgctcgataa
DBGET
integrated database retrieval system
