Pigmentibacter sp. JX0631: QEJ31_10040
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Entry
QEJ31_10040 CDS
T08995
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pij
Pigmentibacter sp. JX0631
Pathway
pij03030
DNA replication
pij03430
Mismatch repair
pij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QEJ31_10040 (dnaE)
03430 Mismatch repair
QEJ31_10040 (dnaE)
03440 Homologous recombination
QEJ31_10040 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pij03032
]
QEJ31_10040 (dnaE)
03400 DNA repair and recombination proteins [BR:
pij03400
]
QEJ31_10040 (dnaE)
Enzymes [BR:
pij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QEJ31_10040 (dnaE)
DNA replication proteins [BR:
pij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QEJ31_10040 (dnaE)
DNA repair and recombination proteins [BR:
pij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QEJ31_10040 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti-like
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WGL58862
UniProt:
A0AA95JWN0
LinkDB
All DBs
Position
complement(2278394..2282050)
Genome browser
AA seq
1218 aa
AA seq
DB search
MQQSSDEFVHLHIHSEYSILDGSIKLKKLIKELSKRGARAAALTDHDGMHGVLEFYLACQ
NEKINGIIGYEANIESAFMADKKQISHLILLAENNTGYANLIKLCTIANTSGKDAIFSNS
TSINWSELEKYSEGLICLTSCLKGELAQHVLAENYDLADSYLNKLINIFGQNNLFVELID
NGLEEQKIIIDRLVAIANKNNLNIVATADVHYLNKKDKETHLSLLAIKNKLQKSDVRGMP
SHIDFHLTTVEEMKEKFGKYPTALSNTVKIAERCNVKIDTKSIFMPDYRQRENESSDECL
IRLSREGLELRKSSVQVWMGTLFTDEIWEDYKKRLEYELSVILKMKFSGYFLIVQDFINW
AKEQNIPVGPGRGSAAGSLVTYALRITNIDPIRFNLLFERFLNPERISMPDIDTDFCQDR
RGDVLNYVYQKYGNRAVSQIVTFGRMMAKNAIKNLARINGWSFHDSNEFAKLIPESPGIT
LEQAFQEEEKIRLKVENEEKTKSLWEGALEVEGTLSSLGIHAAGVIISDRALDERCPLLE
SEGQLLTQFENKYAEKIGLIKFDFLGLKTLTVIDNAVKLIRKRKKTDLDIEYIDLDDKKV
YEMISTAHVTGIFQLESTGMRKLIADLKPTCFTDIIAVLALFRPGPLGSGMVEDFVKRKH
GETQVEYPFPELEPILSDTYGVIVYQEQVQKIAAVLANYSLGEADLLRRAMGKKDKNEME
RQKSRFVSGATENKHDPQKSAELFDLMAKFAEYGFNKSHTAAYGWVTYQTAWLKTYYPTE
FMTAIMSCDLDNTDKIVGYVRDCKRMKIKILPPCVNHSRFEFSIPAENIIQFGLGAVKGL
GSGIINMIVNEREAHGEFSTVPEFIARLDARKLNKKVMESLIKAGAFDAIASNRAELLAN
SDSWLRTIAKEAERDESTGYDIFGVFSNTSQQNSASLENNKEKIETKKSKYSFDFAPTRL
PTLIKTEACSKKILNHLLSVQLKKTKPWNYLDQLNNEFSTLGFYMSGHPADLLRADIKEI
TEISLDQTAIHLEPDNVPDYKRKIVKVAGIVTMLLEKKNKEGNPFLVLKIEDGFGELEVT
LFNKQFTAMQEPIKLNEAIIIECKLKKGIEEGSVKGIVQSIERISNKRIELIQGIVLKTE
EKFLKEPENLILLEKILKQFKGQTLLFMKIEVPDRNVIIKAKLGNHSIIPTDQFILTIEN
TWPGILKVDRIYQKHVIN
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacagtcttctgacgaatttgtccatcttcatatccattccgaatattcaattctt
gatggttcgataaaactaaaaaaactaattaaagaattaagtaaacgaggggcgagggct
gctgctttaaccgatcatgatggtatgcacggtgttctagagttttatcttgcttgtcaa
aatgaaaaaataaatggcattataggctatgaagcaaatattgaatctgcttttatggct
gataaaaaacaaatttcccatttaattcttttagcagaaaataatactggatatgcaaat
ttaataaagctttgcacaattgcaaacacgtctggtaaagatgctatattctctaattca
acttcaattaattggtctgagctagaaaaatattccgaaggattaatatgtttaactagc
tgtttaaaaggagaacttgctcagcatgttcttgctgaaaactatgatctagctgattca
tatttaaataaattaattaacatatttggtcaaaataatctttttgttgaactcatagat
aatggacttgaggaacaaaaaataattattgatagacttgtggcaatagctaataaaaat
aatttaaatattgttgcaaccgctgatgttcattatttaaataaaaaagacaaagaaaca
catttgtcattacttgcaattaaaaataaattacagaagtctgatgttcgaggaatgcca
agtcatatagattttcatttaactactgttgaagaaatgaaagaaaagtttggaaaatat
cctacagcattaagtaacactgttaaaatagcagaacgctgcaacgtaaaaattgataca
aaaagtatttttatgcctgattatcggcagagagaaaacgaatcctcagatgaatgttta
attcgtttatctagagaaggtttggagttacgcaaaagttcagtccaagtttggatgggt
acactttttactgatgaaatttgggaagattataaaaaacgtttagaatatgagctctca
gttatcttaaaaatgaaattttcaggctattttttaatcgttcaagactttatcaattgg
gcaaaagaacaaaatattcctgtcggaccaggaagaggttctgcggcaggaagtttagtt
acgtatgcgttacgaattacaaatatcgatcctatccgctttaacttactgtttgagcgt
ttcctaaatcctgagcgtatttccatgcctgatattgatactgacttttgtcaagataga
cgtggtgatgttttaaattatgtctatcaaaaatacggcaatagagcagtttctcaaatt
gttacttttggtcgaatgatggcgaaaaacgccattaaaaatttggcaaggattaatggc
tggtcttttcatgacagcaatgaatttgcaaaattaattcctgaatctcccggtataacc
cttgaacaagcctttcaggaagaagaaaaaattcgcctcaaagtagaaaatgaagaaaaa
acaaaatcgctttgggaaggagctttagaagtagaaggtactttaagctctttaggaatt
catgctgctggagtaattatttcggatagagcattagatgaacgctgtcctttgctagaa
tcggaaggtcaattattaacacagtttgaaaacaaatacgccgaaaaaataggtctcata
aaatttgactttttaggcttaaaaaccttaacagtaattgataatgctgtaaaactaata
agaaaaagaaaaaagactgatctggatattgagtatatcgatttagacgacaaaaaagtt
tatgaaatgatctctacagcccacgtaacagggatatttcagcttgagtctacaggtatg
cgtaaacttattgcagatctaaaacccacttgttttactgatattattgccgtgctcgca
ttatttcgtccaggccctctgggctcagggatggttgaagattttgtgaaaagaaagcat
ggagaaacacaagtagaatatccatttccagaactagaacccatattaagtgacacttat
ggagttatagtctaccaagaacaagtacaaaaaattgctgctgtcttagcaaattactca
cttggtgaagctgacttattacgtagagccatgggtaaaaaagataaaaatgaaatggaa
agacaaaaaagtcgtttcgtttccggagctacagaaaataaacatgacccgcaaaaatca
gccgaactttttgatctgatggcaaaatttgctgaatacgggttcaacaaaagtcatacg
gcggcttatggctgggtaacttatcaaacggcatggttgaaaacctattaccccactgaa
tttatgactgcaatcatgtcctgcgatttagacaataccgataaaattgttggatacgtt
cgcgattgcaaacgcatgaaaataaaaattcttcccccgtgtgtgaatcattcccgtttt
gaatttagtattcctgctgaaaacatcattcagtttggattaggagcagtcaaaggatta
ggttcgggaattataaacatgatcgtaaatgaaagagaagctcatggagaattctctact
gttccagaatttattgctaggctagatgcaagaaaactaaataaaaaagtgatggaaagt
ttaattaaagctggcgcatttgatgctatagcttccaatcgtgcagaactcttagctaat
tcagatagttggctaagaactattgcaaaagaagcagaaagagatgaatctacaggctat
gatatttttggcgttttttctaatacaagccaacaaaattctgcatctttagagaataat
aaagaaaaaattgaaactaaaaagtcaaaatattcttttgactttgcaccaacccgtttg
ccaaccttaattaaaactgaagcttgttcaaagaaaatattaaatcacttattgtctgtt
caattgaaaaaaacaaaaccttggaattatcttgatcaactaaacaatgaattttccaca
ttaggtttttacatgtctgggcaccctgcagatttattgcgtgctgatattaaagaaata
actgaaatttccttagatcaaacagctattcatttagaacctgataatgtaccagattat
aaaagaaaaattgttaaagtagcaggtatagtaaccatgcttctagagaaaaaaaataaa
gaaggaaatccttttttagtcttaaaaattgaagatgggtttggcgaattagaagttact
ttatttaataaacaatttacagctatgcaagaacctataaaacttaatgaagcaattatc
atagaatgcaaattaaaaaaaggcattgaagaaggaagtgtcaaaggaattgtgcaaagc
atagaacgaatttcaaacaaacgcattgaattaatccaaggtattgttctaaaaacagaa
gaaaaatttctaaaagaacctgaaaatttaattttactagaaaaaatactgaaacagttc
aaaggacaaactttattatttatgaaaatagaagtgccagatagaaatgttattataaaa
gcaaaattaggaaatcattctattatacctacagatcaatttattcttacaatagaaaat
acttggccaggaattttaaaagtagatcgcatttatcaaaaacacgttattaattaa
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