Pigmentibacter sp. JX0631: QEJ31_13685
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Entry
QEJ31_13685 CDS
T08995
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pij
Pigmentibacter sp. JX0631
Brite
KEGG Orthology (KO) [BR:
pij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pij03400
]
QEJ31_13685 (radA)
DNA repair and recombination proteins [BR:
pij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QEJ31_13685 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
AAA_22
ChlI
DUF7125
AAA
AAA_16
nSTAND3
DnaB_C
NTPase_1
nSTAND_NTPase5
AAA_24
Lon_C
AAA_14
TackOD1
PAXNEB
SLFN-g3_helicase
AAA_30
KdpD
NPHP3_N
ATPase_2
AAA_5
MCM
DAP3
NACHT
MeaB
AAA_19
ABC_tran
TniB
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WGL59577
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Position
complement(3160189..3161574)
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AA seq
461 aa
AA seq
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MKNSLKQIFVCNSCGSIHPKWLGKCPDCDAWNSIHEETVQKNQYQQNINGNKADIKPLPK
VEEKLERRLFCGVPELDRVLGGGLVVGSLILLSGDPGIGKSTLLLQALNGLAQRGYRVLY
ASGEESCTQIKLRAERLGSLHMNILVTNETNILAILEAAKTTKPEVLVIDSIQTVYNPEL
PGSPGNVSQVRECTNLILQNAKSQNISTFVIGHVTKEGNIAGPKLLEHLVDTVMHLEGDY
SSGYRILRAQKNRFGSTGEIGVFAMQGHGLVDIPNPSSLFLDQNKKGCEGSAVTITMEGT
RPILLEVQVLVGKTSFASPRRLATGFDTNRFTILLAVLEKRAGLFLSTQDVYANITGGFK
IYETAIDLATAAAVTSSLFNKLLPAKSAYFGEVGLSGEIRMVNHALARIQEAQKLGFEKV
FIPSQNYQLEQPHILKLIEKSEHPFFVIPVEHINEIVHKDR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattctttaaaacagattttcgtctgcaattcatgcggatcaattcatcccaaa
tggttaggtaaatgtcctgattgtgacgcttggaattctatccatgaagaaacagtccaa
aaaaatcagtatcaacaaaatataaatggcaataaggcggatataaaaccccttccaaaa
gttgaagaaaaattagaaagacgtttattttgtggtgttcctgagctggatagagtttta
ggtgggggtttggttgtaggaagtttaattttactgagtggtgatccaggaattggcaaa
tcaactctgcttttgcaagctttaaatggattagcccaacgtggatacagggttctttac
gccagcggtgaagaaagttgtacccaaataaaacttagagccgaaagacttggctccttg
catatgaatatccttgtaacaaatgaaacaaatattttggccattctagaagcagcaaaa
acaacaaaaccagaagttttagtcatagattctatccaaaccgtatataacccagaactg
cctggaagtcctggaaatgttagccaagtgcgtgaatgtactaatctaattttacaaaat
gcaaaaagccaaaatatctcaacctttgttattggccacgtaacaaaagaaggtaacata
gcaggtccaaaattacttgaacatctagttgatactgtaatgcatttagaaggtgattat
tctagtggttatcgcatattaagagcacaaaaaaatcgctttggttctacaggagaaata
ggagtttttgccatgcaaggccatggtctcgttgatatccctaatcctagttcactcttt
ttagatcaaaataagaaaggttgtgaaggttctgctgtcactattacaatggaaggcacg
cgccccattttacttgaagtccaagtacttgttggaaagacatcttttgcatctccgaga
cgattggcaactggatttgataccaatcgttttacaattttacttgcagtacttgaaaaa
agagctggtctatttttatccactcaagatgtttatgcaaacattactggtggttttaaa
atatatgaaactgcaatcgatctagcaactgcggccgcagtaacttcaagcctatttaac
aaacttttaccagcaaaatcagcttattttggggaagtaggattgtctggagaaatacga
atggtaaatcatgcgttagcgagaatccaagaagcgcagaagctcgggtttgaaaaagtt
tttattccgtcccaaaattatcaattagaacagcctcatatattgaaacttatagaaaaa
tctgaacatcctttttttgtaattccagtagaacatattaatgaaatagttcacaaggat
agataa
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