Pigmentibacter sp. JX0631: QEJ31_13965
Help
Entry
QEJ31_13965 CDS
T08995
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pij
Pigmentibacter sp. JX0631
Pathway
pij03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEJ31_13965 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pij03400
]
QEJ31_13965 (uvrB)
DNA repair and recombination proteins [BR:
pij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEJ31_13965 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QEJ31_13965 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_5
AAA_22
Microtub_bd
KIX_2
Motif
Other DBs
NCBI-ProteinID:
WGL59633
LinkDB
All DBs
Position
3240117..3242150
Genome browser
AA seq
677 aa
AA seq
DB search
MSEKPFEISWPVTPTGDQPQAIEKLVSGLSAGLSEQILLGVTGSGKTFTIANVVAKTQRP
TLVIAHNKTLAAQLFQEFKELFPNNAVEYFISYYDYYQPEAYLPSTDTFIDKSASINDNI
DKMRHSATKALFERRDVIIVSSVSCIYGLGAPDTYLNSRIVLNLNAEFSRDDFIRQLISI
QYTRNDISLERGKFRVRGDIIEVVPSSENERAVRIQFWGDKIEKLSTIDALKGTVIEKIQ
KINIYPASHYVLENEKIDEVISQISHDLIEKVSEFKNNGKHIEAQRIEQRTLHDLEMIRE
IGYCQGIENYSRYLDGRSPGKPPATLLDYFPKDYLLVIDESHVTVPQIGGMYRGDRARKE
TLVQYGFRLPAALDNRPLNFDEFKDRMGQTIYVSATPAKYELEHAGTEIVEQIIRPTGLI
DPQILVKPAKGQIDDLLFEIQNVVAKKERILITTLTKKMAENITAYYAEFGIKIKYLHSE
IQSIERVEILRDLRLGIFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSKTSLIQTV
GRAARNANGRVILYADKETESIKFCIEETSRRREKQEKYNTENNITPQTVYKKIPDDLKK
IYNLDYGDEFQEKLIQAIANLDDENILKDAKKLEKYVQKMQKEMIKASQKMDFELAAQLR
DKIFLLKEQILLLTGES
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaaaccttttgaaatttcttggcctgtgacaccaacaggcgatcagccgcag
gctatagaaaaattagtttcaggtttatctgcaggactttcagaacaaatattgcttggt
gtgactggttctgggaagacatttaccattgctaatgttgtcgcaaaaacccaaagaccc
actttagtcattgcacataataaaacattagctgcgcaattatttcaagaatttaaagaa
ctttttccaaataatgcggttgaatattttatcagttactatgactactatcagccagaa
gcctacttgccaagtacggatacttttatcgataaatctgcatctattaacgataatatc
gacaaaatgcggcatagtgcgacaaaagccttatttgaacggcgagacgttattattgtc
agttctgtaagttgtatttatggtttaggagctcccgatacttatttaaattcaagaata
gttttaaatttaaatgcagaattttccagagatgattttattcgccaacttatttccatt
caatatactcgaaatgatatatccttagaaagaggaaaatttcgggtgcgtggtgatata
attgaagtcgttccttcatcagaaaatgaaagagcagtgcgaattcaattttggggagat
aaaattgaaaaattatctacaattgacgcacttaaaggaacagtaatagaaaaaattcaa
aaaataaatatctatcctgcctcgcattatgtcttagagaatgaaaaaattgacgaagtt
atttcccaaatttcccatgatttaattgaaaaagtttctgaatttaaaaataatggaaaa
catattgaagctcaacgaattgagcaaagaacgttacacgacttagaaatgatccgtgaa
attggatactgtcaaggcatagaaaattattctcgttacttagatggacggtctcctggt
aaacctcctgctactttacttgattattttccaaaagattatttattagttattgatgaa
agtcatgtcacagttccacaaattggcggtatgtatcgtggcgatagagcaagaaaagaa
accttagtgcaatatggatttcgcttaccagctgcattagataatcgtccgttaaatttt
gatgaatttaaagatcgaatgggtcagactatttatgtttcagcaactcctgctaaatat
gaattagaacatgcaggaactgaaattgttgaacagattattcgtcctactggcttaatc
gatcctcaaattctcgttaaaccagcaaaaggtcaaattgatgatcttttatttgaaatc
caaaatgttgtagcaaaaaaagaaagaattttaattacaactctgactaaaaaaatggcg
gaaaatataactgcttattatgccgaatttggcataaaaataaaatatttgcattctgaa
attcaaagtatagagcgagtagaaatattacgagatctgcgcttaggtatttttgatgtt
cttgttggtatcaatttgctaagagaaggactcgatttacctgaagtatcattggtagct
attttagatgcagataaagaaggttttttaagaagtaaaacaagcttaatccaaactgtt
ggtagggcggctagaaatgctaatggaagagttattttgtatgctgataaggaaacagaa
agtattaaattttgtattgaagaaacttctagaagaagagagaaacaagaaaaatataat
accgaaaataatattacacctcaaactgtatacaaaaaaattcctgatgatctaaagaaa
atatataatcttgactatggtgatgaatttcaagaaaaattaattcaagctatcgctaat
ttagatgatgaaaatattttaaaagatgctaaaaaactggaaaaatatgtgcaaaaaatg
caaaaagaaatgataaaagcttcgcaaaaaatggattttgaattagcggctcaattacgc
gataaaatctttctattaaaagaacaaattcttttactaacaggtgaatcatag
DBGET
integrated database retrieval system
