Paenarthrobacter ilicis: GMCHHGAN_001843
Help
Entry
GMCHHGAN_001843 CDS
T11653
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pil Paenarthrobacter ilicis
Pathway
pil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GMCHHGAN_001843 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pil03400
]
GMCHHGAN_001843 (uvrA)
DNA repair and recombination proteins [BR:
pil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GMCHHGAN_001843 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GMCHHGAN_001843 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
nSTAND1
AAA_23
AAA_22
AAA_25
APS_kinase
DnaJ_CXXCXGXG
nSTAND3
NACHT
Viral_helicase1
cobW
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
XKQ77377
LinkDB
All DBs
Position
1996890..1999817
Genome browser
AA seq
975 aa
AA seq
DB search
MPKALAEETVIDSPKSVAVVPASKPARPDLSRLVVKGAREHNLQNVDLDLPRDAMIVFTG
LSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDKPDVDFIEGLSPAVSIDQKSTS
KNPRSTVGTITEIYDYMRLLWARVGRPHCPVCGEPISKQTPQQIVDQLLELQAGTRFQVL
APVVRGRKGEFVDLFKELTAKGYSRARVDGELVQLSEPPKLGKQFKHTIEVVVDRLVVKE
EISQRLTDSVETALGLAEGRVLVEFVDLDADDPDRIRAFSEHLACPNEHPLAIDEIEPRS
FSFNNPFGACSACSGIGTRLEVDEELIVPNPELSLGEGAIAPWSLGSATTEYWNRLLEGL
SQELGFSMKTSWEKLSKDVRNTVLHGKDHKVVVQYRNRFGRERKYSTGFEGAIQYVHRKH
GETDSEWARDRYEEYMRQIPCPECNGARLNPASLSVLINGKSIAAVAALPMRECAEFLGS
LTLTPREAQIANQVLKEIQARLTFLLDVGLEYLNLERASGTLSGGEAQRIRLATQIGSGL
VGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIQEADWVVDIGPGAG
EHGGKVVHSGTYKELLANTDSLTGDYLSGRRAIDVPKKRRKYDKKRELKVVGARENNLNN
VDATFPLGLLTAVTGVSGSGKSTLVNEILYKVLANKLNGAKQVAGRHKTITGLEHLDKVV
HVDQSPIGRTPRSNPATYTGVFDNIRKLFAETTEAKVRGYLPGRFSFNVKGGRCEACSGD
GTLKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKTIADVLNMPIEEGAEFFAAFTPI
ARHLKTLVDVGLGYVRLGQPATTLSGGEAQRVKLAAELQKRSNGRSIYVLDEPTTGLHFE
DIRKLLMVLQGLVDKGNTVITIEHNLDVIKSADWIVDLGPNGGSGGGRIIATGTPEQVAK
SKESHTATFLAEILG
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaaagccttagctgaagaaactgtcattgattccccgaagagcgtagcggtggtt
cctgcctcaaagcctgccaggccggatctttcacgcctggtggtcaagggtgcccgggaa
cacaacctccagaatgtggacctggacctgccccgggacgccatgatcgtgttcaccggc
ctctccgggtccggcaagtcctcgttggcgttcgatacgattttcgccgaaggccagcgg
cgttacgttgagtcattgtcggcctatgcccgccaattccttggccaggtggacaagccc
gacgtcgacttcatcgagggactctcacccgcggtgtccatcgaccagaagtccaccagc
aagaatccacggtcaacggtgggcaccatcaccgagatctatgactacatgaggctgttg
tgggcccgtgtcggacgtccccattgccccgtatgtggggagcccatctccaagcagacc
ccccagcagattgtcgatcagctgttggagctccaagcaggcacccgcttccaggtcctc
gctcccgtggttcgtgggcgcaagggtgaattcgtcgatctcttcaaggaactgacagcc
aaaggttactcacgcgcccgtgtggacggtgagctggtgcagctgagcgaacctcccaag
ttgggcaagcagttcaagcacaccatcgaagttgtggttgaccgtttggtggtcaaggag
gaaatcagccagcgccttacggattccgtggagacggcactgggcctcgccgaagggcgc
gtgctggtggagttcgtggacctggacgctgacgatcccgaccgcatcagggcgttctcg
gaacatctcgcctgccccaatgagcacccccttgccattgatgagattgagcctcgttcg
ttctccttcaacaacccctttggtgcttgctccgcctgcagtggcattggcacccggctc
gaagtcgatgaggaattgattgttcccaatcccgagctttccctgggcgagggcgccatt
gccccgtggtcgttgggcagtgcaaccaccgagtactggaaccgcctgctcgaaggtttg
tcgcaggagctcggcttctccatgaagacatcctgggaaaagctttccaaggatgtccgg
aacaccgttctccacggaaaagaccacaaggtcgtagtccagtaccggaaccgttttggc
cgtgagcgtaagtacagcactggatttgaaggtgccatccagtacgttcaccgcaagcat
ggtgagacggattcggagtgggcccgtgaccggtacgaagagtacatgcggcagatcccg
tgccccgagtgcaacggtgcccgcctgaacccggcgtcgttgtcggtcctgatcaatggc
aagtcaattgccgctgtggcggcccttcccatgcgcgagtgtgccgagttcctgggcagc
cttaccctgacgcccagggaggcccagattgccaatcaggtactgaaagaaatccaggcc
cgcctcaccttcctgcttgacgtcgggttggagtacctgaacctcgagcgtgcgtccggc
acgctgtccggtggcgaggctcagcgtattcgactggccacgcagatcggctcgggactg
gtgggtgtcctttacgttctggacgaaccttccatcggccttcaccagcgcgacaaccgc
cgtctgatcgagacactgaccaggctccgtgacctcgggaacacactgatcgtggttgaa
cacgacgaagacaccatccaggaagctgactgggttgtggacattggacccggtgccggt
gagcatggcggcaaggttgtccattccggcacctacaaggaacttctggccaacaccgac
tcgctgactggcgactacttgtccggccgccgggccatcgatgtgcccaagaagcgccgc
aagtacgacaaaaagcgtgagctgaaggttgttggtgcccgtgagaacaacctgaacaac
gtggacgccaccttcccgctgggtctcctgacggccgtcaccggtgtcagcggctccggc
aagtccacactggtcaacgagatcctttacaaggtcctggcaaacaagctcaatggcgcc
aagcaggttgcaggacgccacaagacgattaccgggcttgagcacctggacaaggttgtt
cacgtggaccagagccccatcgggcgtacgccgcggtcaaaccccgcaacgtacaccgga
gtgtttgacaacatccgcaagttgtttgcagaaaccacggaagccaaggtgcgcggatac
ctgcccggcaggttctcgttcaacgtcaagggtgggcgctgcgaagcctgctcgggtgac
ggcacgctcaagatcgagatgaatttcctgccggacgtttatgtgccttgcgaggtctgc
catggggcgcgctacaaccgcgagaccctggaagtgcactacaagggaaagaccatcgcc
gacgtcctcaacatgccgatcgaggaaggcgcggagttcttcgccgcgtttacgccaatc
gctcggcacttgaagacgctggtggacgttggcctgggttacgttcgcttggggcagccg
gccaccacgctgtccggtggcgaagcccaacgcgtgaagttggctgctgaactgcagaag
cgctccaacggacgcagcatctacgtcctggacgagcccactactggtctgcactttgaa
gacatccgcaagctgctcatggttctccaaggcttggtggacaaaggcaacaccgtcatc
accattgaacataatctcgatgtcatcaagtctgcggactggatcgtcgatcttggtccc
aatggtggttcaggcggtgggcggatcatcgccaccggcacgcctgagcaagttgccaaa
tccaaggagagccacacggcaaccttcctggctgagattctgggttag
DBGET
integrated database retrieval system
