Pseudomonas imrae: OQ460_04390
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Entry
OQ460_04390 CDS
T11325
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pim Pseudomonas imrae
Pathway
pim00300
Lysine biosynthesis
pim00470
D-Amino acid metabolism
pim01100
Metabolic pathways
pim01110
Biosynthesis of secondary metabolites
pim01120
Microbial metabolism in diverse environments
pim01230
Biosynthesis of amino acids
Module
pim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OQ460_04390 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OQ460_04390 (dapF)
Enzymes [BR:
pim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OQ460_04390 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XLY94136
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All DBs
Position
complement(813299..814102)
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AA seq
267 aa
AA seq
DB search
MPLSFHKMHANGDDFVIVDARHSANPMTAALARRMGDRIQGIGFNQLAVMLDCDDAAARV
MFWNADGSELEVCGSATRGVAARLMCESNKTSVVLRTVRGLHTCERAATGTITVSMGEAR
FGWSDIPLARQLDTAFLPLEGTPAACSMGNPHCTYFVDDLAALDIANIGPAIEAHPLFTL
KTNVHFVQIINRRHVRLRIWERGGGIPQGSGSCSCGAVVNGIRRGLLDDCVEVQCDGGTV
TVQWSGTGPVLLSGPVEATFSGTFIHS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgagctttcataaaatgcacgccaatggcgacgatttcgtcattgtcgatgcg
cggcactcagccaatcccatgacagccgcccttgcccggcgcatgggcgatcgaatccag
gggatcggcttcaatcaactcgccgtaatgctcgattgcgatgatgcagcggcccgcgtg
atgttctggaatgccgatggttccgagctggaggtatgtggcagcgctacgcggggtgtg
gcagccaggctgatgtgtgaatcaaacaaaacgtcggtggttctgcgcaccgtccgcggc
ctgcatacctgcgaacgcgctgcaaccggcacgattactgtcagcatgggcgaggcgcgt
ttcggatggtcggacattcccctggcccggcagctggataccgcgttcctgccactggaa
ggcacgcccgccgcgtgtagcatgggcaacccgcactgcacctactttgtcgatgacctg
gcggccctcgatatcgcgaacatcgggccggctatcgaagcccaccctttgtttacgctc
aagacaaatgtgcacttcgtgcagatcatcaaccgccggcatgttcggctacgtatctgg
gaacgcggcggtggcataccgcaaggctcaggctcctgttcgtgtggcgcagtcgtcaac
ggaatccgtcgtggtttgttggatgattgcgttgaggtccagtgcgatggcggaaccgtg
acggtccaatggagcggcaccggcccggtattgctcagcggcccggttgaggcgacgttt
tcgggaacatttatccacagctga
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