Pseudomonas imrae: OQ460_04790
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Entry
OQ460_04790 CDS
T11325
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pim Pseudomonas imrae
Pathway
pim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OQ460_04790 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pim03019
]
OQ460_04790 (pnp)
03016 Transfer RNA biogenesis [BR:
pim03016
]
OQ460_04790 (pnp)
Enzymes [BR:
pim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OQ460_04790 (pnp)
Messenger RNA biogenesis [BR:
pim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OQ460_04790 (pnp)
Transfer RNA biogenesis [BR:
pim03016
]
Prokaryotic type
tRNA degradation factors
OQ460_04790 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
XLY94210
LinkDB
All DBs
Position
894744..896849
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVLST
SKKTDPDVAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPIWDWKAAPEA
TALLGAIRSEFGAAISDAYTITIKADRYARLGELKDQVVAKLSGEEGQPSSSEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ESKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaatttcagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgta
ttggtgaccgttgtcggtgccaagcaagccgatccaggcaagggcttcttcccgctgtct
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgttctctccacc
agcaagaaaaccgatccggacgtcgctgcaatgatcggtacctcggctgccctggccatc
tctggtattccttttgatggtccgatcggcgctgcccgcgttgctttccacgaaagcacc
ggctacctgttgaacccgacttacgagcaactgaaagcgtcaagcctggacatggtcgtt
gccggtacctcggaagccgtgttgatggttgagtcggaagccaaagagctgaccgaagac
cagatgctgggcgctgtactgtttgctcacgacgagttccaggttgtgatcaacgccgtt
aaagaactggccgccgaagctgccaagccaatttgggactggaaagcagccccggaagcc
accgcattgctgggcgctatccgctccgagttcggcgctgcgatttccgatgcctacacc
atcaccatcaaggctgaccgttacgctcgcctgggtgagctgaaggaccaggttgttgcc
aagctgtccggtgaagaaggccagccttcttccagcgaagtcaaagcggccttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggccgc
gacacccgcaccgtacgtccgttgaacatcgaagtcggtgttttgccgaagactcacggt
tcggcgctgttcacccgtggtgaaacccaggccctggtagttgcaaccctgggcactgcc
cgtgacgcacagttgctggacaccctggaaggcgagaaaaaagaccccttcatgctgcac
tacaacttccctccgttctcggtgggtgagtgtggtcgcatgggcggtgctggtcgtcgt
gaaatcggtcacggtcgtctggctcgtcgctcggttcaggcgatgctgccggctgctgac
gtgttcccgtacaccattcgtgttgtgtcggaaatcactgagtccaacggttccagctcc
atggcttcggtctgcggtgcttccctggcgctgatggatgccggtgtaccgatgaaggcg
ccagttgccggtatcgcgatgggtctggttaaagaaggtgagaagttcgccatcctgacc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtagccggtaccgcc
aagggtgttaccgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcccgcaccgagctgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggtggtgcgacgatccgtgcgatc
tgtgaagaaaccaaggcttcgatcgatatcgaagacgacggttcgatcaagatctttggc
gaatccaaggaagctgctgaagctgcacgtcagcgcgtcctgggcatcactgccgaggcc
gagattggcaagatctacgtgggcaaggttgagcgtatcgtcgatttcggcgcattcgtc
aacatcctgccaggcaaagacggtctggttcacatttccatgctgagcgatgctcgcgtc
gagaaagtgaccgacattctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctctccatcaaggacgtagcggcagccaaggcctcgggc
gtttaa
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