Pseudomonas imrae: OQ460_06320
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Entry
OQ460_06320 CDS
T11325
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pim Pseudomonas imrae
Pathway
pim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OQ460_06320 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pim03019
]
OQ460_06320 (groL)
03110 Chaperones and folding catalysts [BR:
pim03110
]
OQ460_06320 (groL)
03029 Mitochondrial biogenesis [BR:
pim03029
]
OQ460_06320 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pim04147
]
OQ460_06320 (groL)
Enzymes [BR:
pim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OQ460_06320 (groL)
Messenger RNA biogenesis [BR:
pim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OQ460_06320 (groL)
Chaperones and folding catalysts [BR:
pim03110
]
Heat shock proteins
HSP60 / Chaperonin
OQ460_06320 (groL)
Mitochondrial biogenesis [BR:
pim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OQ460_06320 (groL)
Exosome [BR:
pim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OQ460_06320 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OQ460_06320 (groL)
Exosomal proteins of breast cancer cells
OQ460_06320 (groL)
Exosomal proteins of colorectal cancer cells
OQ460_06320 (groL)
Exosomal proteins of bladder cancer cells
OQ460_06320 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XLY94491
LinkDB
All DBs
Position
1214516..1216162
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLTGVNILADAVKATLGPKGRNVVIEKSFGAPTITKDGVSVAKEI
ELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDIKRGI
DKATIAIVKELKNLSKPCADTKAIAQVGTISANSDSSIGDIIAQAMEKVGKEGVITVEEG
TGLDNELSVVEGMQFDRGYLSPYFINKPETMVAELESPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAGVQGDIEGRIAQIRAQVAETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALEAIVDLKGENADQDVGIAVLRRAVEAPLRQISANSGDEPSVVVNEVKNGKGNYGYNA
ATGVYGDMIEMGILDPTKVTRSALQAASSIGGLILTTEAAIAEAPKKEGSAGGGMPDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgactccgcccgcaagaaaatgctcaccggtgtc
aacatcctggctgacgcagtaaaagcgaccttgggcccgaaaggccgtaacgtagtgatc
gagaagagcttcggtgctccgaccattaccaaggacggcgtttccgttgccaaggaaatc
gaactcgaagaccgtttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgcaggcgacggcaccactaccgctaccgtcctggctcagtctatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacatcaagcgcggtatc
gacaaggcgaccatcgccatcgtcaaagaactgaagaacctgtccaagccatgcgccgac
accaaggccatcgctcaggtcggcactatctctgccaactccgacagctccattggcgac
atcattgcccaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
actggcctggataacgaactgtcggttgtagaaggcatgcagttcgaccgtggttacctg
tccccgtacttcatcaacaagccggaaaccatggtcgccgagctggaaagcccgctgatc
ctgctggtcgacaaaaagatctctaacatccgcgaaatgctgccagtactggaagccgtt
gccaaggccggccgcccactgttgatcgtgtccgaagacgttgaaggcgaagccttggcg
actctggttgtgaacaacatgcgcggtatcgttaaagtcgcagccgtcaaggctccaggc
ttcggcgatcgtcgcaaggccatgctgcaggacatcgctgttctgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcgccaccctggaaaacctgggtagcgcc
aagcgcgtgaccatttccaaggaaaacaccatcatcgtcgacggtgctggcgtacaaggc
gacatcgaaggccgtatcgctcagatccgtgctcaggttgccgaaacttcctcggactac
gaccgtgaaaaactgcaggaacgtctggccaagctgtccggcggcgtagcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgcgcagccgtcgaagaaggcgtggtacctggcggtggcgtggcactgatt
cgtgccctggaagccatcgttgacctgaaaggcgaaaacgccgaccaggacgtgggtatc
gcagttctgcgtcgcgctgttgaagctccgctgcgtcaaatctccgccaacagcggcgac
gagccaagcgttgtggtcaacgaagtcaagaacggcaaaggtaactacggttacaacgct
gcgactggcgtgtacggcgacatgatcgaaatgggcatcctggatccaaccaaggtgact
cgttcggctctgcaagcggcatcttccatcggcggtctgatcctgaccaccgaggctgcc
attgccgaagcaccgaagaaagaaggctcggctggcggcggtatgccagacatgggcggc
atgggtggcatgggcggcatgatgtaa
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