Pseudomonas imrae: OQ460_07060
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Entry
OQ460_07060 CDS
T11325
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pim Pseudomonas imrae
Pathway
pim00061
Fatty acid biosynthesis
pim00071
Fatty acid degradation
pim01100
Metabolic pathways
pim01212
Fatty acid metabolism
pim02024
Quorum sensing
pim04146
Peroxisome
Module
pim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OQ460_07060 (fadD1)
00071 Fatty acid degradation
OQ460_07060 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OQ460_07060 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
OQ460_07060 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pim01004
]
OQ460_07060 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pim04147
]
OQ460_07060 (fadD1)
Enzymes [BR:
pim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OQ460_07060 (fadD1)
Lipid biosynthesis proteins [BR:
pim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OQ460_07060 (fadD1)
Exosome [BR:
pim04147
]
Exosomal proteins
Exosomal proteins of breast milk
OQ460_07060 (fadD1)
Exosomal proteins of breast cancer cells
OQ460_07060 (fadD1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
XLY94630
LinkDB
All DBs
Position
1378478..1380169
Genome browser
AA seq
563 aa
AA seq
DB search
MIEDFWKDKYPAGIAADINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTSVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPQAIKFNDVLAKGHGQPVIDASPASNDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCSICEGYGM
TETSPVATVNPIQNIQIGTIGIPVPSTLCKVISDEGVELPLGEIGELCVKGPQVMKGYWQ
REDATAEILDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKEQVMEHMRANVTGYKVPKAVEFREALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtaccccgccgggattgctgcagacatcaatcca
gacgagtatccaaatattcaggcggtactgaaacagtcctgccagcgcttcgccaacaaa
ccggctttcagcaacctgggcaagacaatcacctacggtgagttgtacgaactgtccggt
gcctttgccgcgtatctgcaacagcataccgacttgcagcccggtgatcgaatcgccgtg
cagttgcccaacgtcttgcaatatccggtcgccgttttcggtgctatccgcgccggcttg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacatcaattcaacgat
tccggcgccaaggccctggtgtgcctggccaacatggcgcatctggcggaaaaagtcgta
cccaagacctcggtcaaacatgtgatcgtcactgaagtggctgacctgctgccgccgctc
aagcggctgttgatcaacagcgtcatcaagtacgtgaagaagatggtcccggcctatcac
ttgccccaggcgatcaagttcaacgatgtcttggccaaggggcacggtcagccggtcatc
gacgccagtcccgccagcaatgacgtggcggtgcttcaatacaccggcgggactaccggc
gtggccaagggcgcaatgctgacccaccgcaatctggtagcgaacatgctgcagtgcaag
gcgctgatggggtccaacctgcacgaaggctgcgagatcctgatcacgccgctgccgctg
tatcacatctatgccttcacttttcactgcatggcaatgatgctgatcggcaatcacaat
atcctgatcagcaatccgcgcgacctgccggcgatggtcaaggaattgtcgaagtggaag
ttcagcggctttgtcggcctgaataccttgtttgtggcactgtgcaacaacgaaggtttt
cgcaagctggacttctcggccctcaaagtcaccctgtccggcggcatggccttgcagctg
gctgccgccgaacgctggaaagcggtcaccggttgctccatctgcgaaggttacggcatg
accgaaaccagcccggtcgccaccgtcaacccgatccagaacatccagatcggtaccatc
gggattccggtgccgtcgaccctgtgcaaagtcatctccgatgaaggcgtcgagttgccg
ctgggggaaatcggcgagctgtgcgtcaagggcccgcaggtgatgaagggttactggcag
cgtgaggacgccactgccgagatcctcgacagcgaaggctggttgaagaccggtgatatc
gcgatcatccagccggacggctatatgcgtatcgtcgaccgcaagaaagacatgattctg
gtctccggtttcaacgtctaccccaacgagctggaagatgtgttggcggggctgccgggc
gtgctgcaatgcgcggccatcggtgtaccggacgagaaatcgggcgaacacatcaagctc
tttatcgtggtaaagccgggcgcgacgttgaccaaagagcaagtcatggaacatatgcgc
gccaatgtcaccggctacaaggtgcccaaggccgtggagttccgcgaggcgttgccgacc
accaacgtcggcaagatcttgcgccgtgagttgcgcgatgaagagttgaagaagctgggt
ctgaaaaagtaa
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