Pseudomonas imrae: OQ460_07330
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Entry
OQ460_07330 CDS
T11325
Name
(GenBank) dermonecrotic toxin domain-containing protein
Organism
pim Pseudomonas imrae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ToxA_N
LRR_8
LRR_4
LRR_14
LRR_9
LRR_EndoS
Motif
Other DBs
NCBI-ProteinID:
XLY94679
LinkDB
All DBs
Position
complement(1426537..1431594)
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AA seq
1685 aa
AA seq
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MTTPVPQFSIQAAVQAVHNTPAGVHNRLAQWLGEASSDKRKALKNTRPVFSDWHVRASRQ
QHAPLKQAMGNNWAAQNQVDTALAALQTPQQFATSLLQPALDQRFSVTADVSTTYLRLYA
PLSTPLLPIPTGGTKVWTVSLVEAALHNFDLAESEPKAYTPDSTFITQPSATGQFDTLPS
VKSKISIVQFIRLCRELDVGKKYQAYLKDFFGFSNPVLKAALRNKVILSLKAEAQASLHM
ARLKNDVSDLAFYLLQGQLQGLEGMMLEGKKLLSHDLSLMDAPLTGIVLFAADLEVHRGE
APVIAYIPGDPQAPLKYYSNGTAFMQDLTDKLRSAEYQQFFSRFINHEHLGYFFANLNSR
LSQVVWHKPVPGDPQPAWRDDPVSNPKLQFSATKITGDLYEHLYEGKLDKLLNDAQVIAV
STADADSNARWQRWDILKKIAKTLLEIAAFIATPFIPPLGVLMLGYTAFQLLDETFEGII
DWAEGLKDQAFGHLMSIFEQMVQLGMFAAGAPIAEGLLRQALPEKLWEFFDKLHPVTSGD
GKTRLWNPDLKPYAHDIKLPAESRPNSEGLHAHERKKILPLNGQHFAVGQRSGNTFLEHP
TRAHAYRPRVMGNGKGAWVTEVDQPLTWNHYTLLRRLGPSADALSEARLEQVRQISGIDD
NALRKMYMDRQPPAPLVSDTLKRVDIDQQLEDFIDQMNSDDPLRYQQANPQTQLWVLSNT
GLWPESRTLRFIDAKGETVWELKGQDDAAVAQIHEAQLKNGDFLKTVLETLDESERKALL
EEEFGYPSTSVLVRAAKLRKRLARAAAEKRASLFDSLYRGQEKTDDARLQKIIDTTSGLP
LSAAEEVLRAATGEELLEIDQGRVPSHLLEQARWAAHEIRTSRAYEGLYMKALDGSDTHR
LALHSLEKLPGWSPQVRLEVTDFNRTGTVRDAIGDPQAPIQRVLVRTAEGNYVPENATGT
LFGETDFYTAVLQALPDAQRDALGIHIGQGPVLRQTLRRYALPRAEVGKLLADAPVRKPT
YDPNLMRLPGGMDGYHAPPATPGTSRQPSLEARLLDLYPSLRPEEIPETLSAIRSHPGSP
EQTLQSLKHQFLQLEADLSTWHSNTPKTLLDTDLPLSRSVFEAEQHNRLFWKQQLIRAWR
VETPEDNYFENTNDNGHQLLLTRPVYGELPVLKTDLRAISYLELKSYPTTRGTVGFLEHF
PNLRGVNISDIALKTLPAKLNTLARLNELRLHNCGISLTNQSRTNLATLNGLRTLDLANN
PLTLAPNLEHMSELQTLNLNQTQITQLPHGLTNRLQLTRADLSDNQIHELPDALFTLPRE
RAAALDLSGNPLSPATLARIKTYCQDTGEHFGADANLDERRLVHELYPTFTAREANRFIF
KLPGGLDDVMATLVRLKADYQRLQTDLEEWAVDVPENHPTTSAPLHEQVRAQQQVTRRAF
KTLLEECWQREAPLDENHEPLSDTYELASTLPVMGDLPKLNVTFKHVSRIELSGVQTTSI
PEGFLKQFPQLETLLIHRYALQDIPLDIFKLAKLKTLSLTHSSVHLTPTTADALSGLENL
GYLDLGDNALGITPNVSKMSGLSTLMIENAGLTEVPQGTFNLPSLNHLNLSNNQITELPT
DILEVAPDWADDFELNGNPFSAATIAMLRTYYQRTAVDFGVIEVGLDEQMNPVPSPDESE
EEMEQ
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacacctgtgccacaattttccattcaagccgctgtacaagccgtacacaacacc
cctgccggggttcacaaccgccttgcgcaatggctgggcgaagcctcgagtgacaagcgc
aaggccttgaaaaacactcgccccgtgttcagcgattggcatgtccgcgccagccgccaa
cagcatgcgccgctcaaacaggcaatgggcaacaactgggctgcgcaaaaccaggtagac
actgccctcgccgccctccagacgccgcagcaattcgcgacatccttgttgcaaccggca
ctcgaccagcgttttagcgttacagctgatgtcagcacgacctacctgcgcctatacgca
cctttgagcacgcccctgctgcccattccgacaggaggcaccaaggtctggaccgtgtcg
ctggtggaagcggctctgcataacttcgacttggccgaaagcgaaccaaaggcctatacg
ccagactcgactttcattacccaaccttccgccaccggccagttcgacacactgccgtcg
gtgaagagcaaaatcagtatcgtgcaatttatccggctgtgccgcgagttggacgtcggg
aaaaaatatcaggcctatctcaaggacttcttcggtttcagcaatcctgtgctcaaggcc
gcgttacgcaacaaggtaatcctgagcctgaaagccgaagcgcaggccagcttgcatatg
gctcgcctgaaaaacgatgtgagcgacttggcgttttatttacttcaaggccagttgcag
gggctggaaggcatgatgctggaaggcaagaagctgctcagccatgacctgagcttaatg
gacgcgccgctcaccggtatcgtgctgttcgctgcagatctggaggtgcaccgcggcgaa
gcccccgtgattgcgtacattcccggcgatccgcaagctcctctcaaatactactccaac
ggcaccgcgttcatgcaggaccttaccgacaagctgcgcagcgccgagtaccaacagttt
ttcagtcgcttcatcaaccatgaacacctgggctatttctttgccaacctcaacagtcgc
ttgtcacaggtcgtctggcacaagcccgtgcccggtgatccgcagccggcctggcgcgac
gacccagtgagcaatcccaagctgcaattttcggcaacgaagatcaccggcgacctgtac
gagcatctgtatgagggcaaactcgacaaactgctcaacgatgcccaggtaattgccgtc
tccaccgcagatgccgatagcaacgcacgctggcaacgctgggacatcctgaaaaaaatc
gccaagacccttctggaaatagccgcgtttatcgccacaccgttcatcccgccgctcggc
gtcctgatgctcggctacacagcctttcaactgctcgatgaaaccttcgaaggcatcatc
gactgggccgaaggtctcaaggaccaggcattcgggcatctaatgtcgatttttgaacag
atggtccaactgggcatgttcgctgccggtgcaccgattgccgaaggcttgctgcgccag
gcgttgcctgagaagctatgggaatttttcgacaagcttcaccctgtcaccagtggcgac
ggcaaaactcgcctctggaaccccgacctgaaaccctacgctcacgacatcaagctcccc
gccgaatcacgccccaacagcgaagggttgcatgcccacgaacgtaaaaagatcttgccc
ctcaatgggcaacacttcgccgttgggcaacgttccggcaacaccttccttgaacacccg
acccgcgcgcacgcctaccgcccaagggtgatgggcaatggcaaaggcgcctgggtgacc
gaagtggaccagccgttgacctggaatcattacaccctgttgcgccgcctggggccgtcg
gccgatgccctgagtgaggcgcgtcttgagcaggttcgtcaaatcagcgggatcgacgac
aacgccttgcgcaagatgtacatggaccgccaaccaccggccccactggtgagcgacaca
ctcaagcgcgtcgacatcgaccagcaattggaggatttcatcgatcagatgaacagtgac
gatcccctgcgctatcaacaggccaacccgcagacccaactatgggtattgagcaatacc
ggcctctggccagaatccaggacgcttcggtttatcgatgccaaaggtgaaaccgtttgg
gaattaaagggccaggacgatgctgccgtcgcgcaaattcatgaggcgcagctgaaaaat
ggtgactttctgaaaaccgttctggaaacactggatgaatcagaacgcaaagccctgctg
gaagaagagtttggataccccagcacctcagtgctggtacgcgcagccaagctgcgaaaa
agactggcacgtgctgctgcggaaaaacgcgcctctttgtttgattcgctttatcgagga
caggaaaaaaccgacgacgcacgcctgcaaaaaatcatcgacaccacatcaggcctaccc
ctcagcgcggcagaagaagtactgcgcgcagccaccggagaggagttgctggagatcgac
caaggacgcgtgccgtcgcacctgctcgaacaggcacgctgggccgcccatgaaatcaga
accagtcgtgcgtatgaaggactgtatatgaaggcactggatggcagcgacacgcaccgg
ctagccctgcattcgttagaaaaattaccgggctggtcgccacaggttcgcttggaagta
acagacttcaaccgcaccggcacggttcgcgatgccatcggcgaccctcaagcacccatt
cagcgagtgctggtgcgtacagccgaaggcaactacgtgcccgagaacgccacgggcacc
ctattcggcgaaaccgatttttacaccgccgtgctccaggcgcttcccgacgctcagcgc
gacgcgctcggtattcatattggtcaaggtccggtgttgcgacaaaccttgcgccgctat
gcgctgcctcgtgccgaagtgggaaaattgctggccgatgcacctgtgcgcaaacccacg
tacgacccgaacctgatgcgcttgccaggcggcatggacggttaccacgcgccaccagct
acacctggcaccagccggcaaccctctttggaagctcgtttactcgacttgtaccccagt
ctgcgcccggaagaaatacctgaaacattgagcgctataagaagtcaccccggctcgccc
gagcaaacgcttcagagcctgaagcaccagtttttgcaactggaagcagacttatcgacc
tggcactccaacacccctaaaaccttactcgacaccgatctaccgctgagtcgctcggtg
ttcgaggcagaacagcacaatcgtctgttctggaaacaacaactgatccgtgcctggcgt
gtcgagaccccggaggataattacttcgaaaacaccaatgacaacggccatcagttgctc
cttacccgacctgtatacggtgaattgcctgtcctgaaaaccgacctcagagcaatctcc
tacctagaactgaaaagctaccccaccactcgaggtactgtaggctttcttgagcacttc
ccaaatctgcgcggtgtgaatatcagcgatatagcgctcaagacgctccctgcgaaactc
aacacacttgcacggctcaacgagctgagattacacaactgcggtatcagcctgacaaat
caaagccgtacaaatctcgctacgttgaacgggcttagaactcttgatctggccaataat
ccgctgacgcttgcgcccaatcttgaacatatgtctgaattgcagaccctgaacctgaat
caaacccagataacccaactcccccatggcctgactaatcgcctccaattgacgcgcgca
gacctcagcgacaaccaaatccatgagttacccgacgcgctcttcaccctaccccgcgaa
cgcgcggcagccttggatctttcaggcaatccgctttcacccgcaacgcttgcacggata
aaaacctactgccaggacaccggcgagcacttcggtgctgacgccaaccttgacgaacgt
cgcctggtccatgaactctatccaaccttcaccgcccgcgaggccaaccggtttattttc
aagctgcccggaggtctagacgatgtcatggcgacgctcgtacgcctcaaggccgattac
cagcgcctgcaaacggaccttgaagaatgggcagtggacgtgcccgaaaaccatccgacc
acgagcgccccgctgcatgaacaggtacgcgcacaacaacaggtcactcgaagagccttc
aagaccttgctggaggaatgctggcagcgggaagcgcccctggacgagaaccatgagccg
ctcagcgacacctacgaactggcctcgacactacctgtgatgggcgacttaccgaagttg
aacgtcacattcaagcatgtctcccggatcgagctgagcggggtgcaaaccacatcgatc
cctgagggttttctcaagcaattcccccaattggaaaccctgctgatccaccgctatgca
ttgcaagacatcccactcgatatctttaagctggcaaaactcaagacgctcagcctgacg
cacagcagtgtccacttgacgccaaccacggccgacgcgttgagtggccttgaaaacctg
ggatatctggacctgggtgacaatgcactgggaatcacaccgaatgtcagcaagatgtcc
ggattaagtacattgatgatcgaaaacgcaggccttaccgaagtcccgcaagggacattc
aaccttccctccctcaatcacttgaacttgagcaacaaccagattaccgagcttcccact
gacatcctcgaagtggctcccgactgggcggatgacttcgaacttaacggcaacccattt
tcagcggcaacgattgccatgttgcgcacctactaccagcgcaccgctgtggattttggg
gtgatcgaggttggactggacgagcagatgaatcctgtgccctcacccgacgagtccgaa
gaagagatggaacagtaa
DBGET
integrated database retrieval system
