Pseudomonas imrae: OQ460_08625
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Entry
OQ460_08625 CDS
T11325
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pim Pseudomonas imrae
Pathway
pim00071
Fatty acid degradation
pim00280
Valine, leucine and isoleucine degradation
pim00310
Lysine degradation
pim00362
Benzoate degradation
pim00380
Tryptophan metabolism
pim00410
beta-Alanine metabolism
pim00640
Propanoate metabolism
pim00650
Butanoate metabolism
pim00907
Pinene, camphor and geraniol degradation
pim00930
Caprolactam degradation
pim01100
Metabolic pathways
pim01110
Biosynthesis of secondary metabolites
pim01120
Microbial metabolism in diverse environments
pim01200
Carbon metabolism
pim01212
Fatty acid metabolism
Module
pim_M00087
beta-Oxidation
pim_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OQ460_08625 (fadB)
00650 Butanoate metabolism
OQ460_08625 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OQ460_08625 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OQ460_08625 (fadB)
00310 Lysine degradation
OQ460_08625 (fadB)
00380 Tryptophan metabolism
OQ460_08625 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OQ460_08625 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OQ460_08625 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OQ460_08625 (fadB)
00930 Caprolactam degradation
OQ460_08625 (fadB)
Enzymes [BR:
pim01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OQ460_08625 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OQ460_08625 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OQ460_08625 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
OQ460_08625 (fadB)
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Other DBs
NCBI-ProteinID:
XLY94920
LinkDB
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Position
1711221..1713368
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRIMASTAKVGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENAAEDAL
KVGAVDAVVAPEKLAEAALSLVKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKEVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVHEVLAPIVYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggctgtagataccatcaaggctgatgcatcgatcaaaggtgtgatcgtctccagc
ggcaaggacgtgtttatcgtcggcgccgacatcactgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgacttcgaa
gacctcaacgtaccgaccgttgccgcgatcaatggcatcgcgctgggcggcggtctggaa
atgtgcctggccgcagatttccgcatcatggccagcactgcgaaagtcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgcatcattggt
gccgacaacgccattgagtggatcgccgccggtaaggaaaacgctgctgaagacgcgctg
aaagtcggcgctgtcgacgcagtagtggcgcccgagaagctcgctgaagccgcattgagc
ctggtcaaaggcgccatcagcggcgagtttgactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaagggtttt
gtggctggccaggccggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaggctgctaacttcggtcgcgacaaagccctggaagtggaagctgcaggcttcgtcaaa
ttggcgaaaacctcggctgcccagagcctgatcggcttgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctatgacgaaatcgccaaggaagtgaaacaggccgccgtactc
ggcgccggtatcatgggtggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacgggatcgagcagggcctggcggaagccgcaaaactg
ctggtgggccgcgttgataaaggtcgcatgaccgctgcaaaaatggctgaagtgcttaac
ggtattcgtcctacgctgtcctacggtgatttcggtcacgtcgacctggtggtcgaagcg
gttgtcgagaatccgaaggtcaagcaggcggtattggctgaagtcgaagctcaggtcaag
gaagacaccattctggcgtccaacacctcgaccatttccatcacgttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgttgccaccaccgtggcc
tacgccaagaaaatgggcaagaaccctattgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtgagcgctggtgtggac
tttgtgcgcatcgataaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggtatcgacactggccatcacggccgtgacgtaatggctgaaggtttc
ccggaccgcatgaaagacgaccgccgttcggctgtcgacgcgctctacgaagccaagcgc
ctgggccagaagaatggcaagggtttctacgcctacgagaccgacaagaagggcaagcag
aagaaagttgccgacccgtctgtgcacgaggtcctcgcgccaatcgtctacgagcagcgt
gaggtgtccgacgaggacatcatcaactggatgatgatcgcactgtgcctggaaactgta
cgttgcctggaagacggcatcgttgaaaccgctgccgaagccgatatgggcctggtctac
ggtattggtttccctccattccgtggcggtgcgttgcgttatatcgattccatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgagatggccaagaacggtcagagcttcttcggttaa
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