Pseudomonas imrae: OQ460_09375
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Entry
OQ460_09375 CDS
T11325
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pim Pseudomonas imrae
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pim03032
]
OQ460_09375 (gyrA)
03400 DNA repair and recombination proteins [BR:
pim03400
]
OQ460_09375 (gyrA)
Enzymes [BR:
pim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OQ460_09375 (gyrA)
DNA replication proteins [BR:
pim03032
]
Prokaryotic type
DNA Topoisomerases
OQ460_09375 (gyrA)
DNA repair and recombination proteins [BR:
pim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OQ460_09375 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XLY95055
LinkDB
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Position
1879470..1882124
Genome browser
AA seq
884 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA
VVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILSSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERV
QEPSEVEGEELEGEGFDGEVIAAGDDNVDEPTLDAAADEEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaagcagtcc
tacctcgactacgcaatgagcgtaattgtcgggcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcatcggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggcccagccgttttccctgcgctac
ctgctggtagacggccagggtaacttcggttcggtcgatggcgacaacgccgcggccatg
cgatacaccgaagtacgcatgaccaagctggcgcacgagctgctggccgacctgcataaa
gaaaccgtggactgggtgccgaactacgacggtaccgaaatgatcccggcggtcatgccg
accaggatcccgaacttgttggtcaacggctccagcggcatcgccgtgggcatggccacc
aacatcccgccacacaacctcggtgaagtcatcgacggttgcctggcactcatcgacaac
cctgagctgactgtcgatgagctgatgcaatatatccctggtccggacttcccgaccgcc
gcgatcatcaatggtcgcgccggcatcatcgaagcctaccgcaccggtcgcggccgcatc
tacatgcgtgcccgctcgatgatcgaagacatcgacaaagtcggtggtcgccagcagatc
gtcatcaccgaactcccgtaccagttgaacaaggcgcgtctgatcgagaagatcgccgag
ctggttaaagagaagaagctcgaaggcatcaccgaactgcgcgacgagtccgacaaagac
ggcatgcgcgtggtgatcgagctgcgtcgtggcgaagtgcctgaggttatcctcaacaac
ctctacgcccagactcagctgcaaagcgtgtttggtatcaacgttgtggcactgatcgat
ggccgccctcgtatcctgaacctcaaggatctgctggaagccttcgtacgtcaccgtcgc
gaagtggtcacccgtcgtaccgtgttcgaactgcgcaaggcccgcgaacgcggccatatc
ctggaaggccaggcggtggcgctgtcgaacatcgatccggtgatcgcgctgatcaaggct
tcaccgactccgtcggaagccaaggaagcgctgatcaagatgccgtgggaatccagcgcc
gtagtggcgatggttgagcgtgccggcgccgattcgtgccgtccggagactctggatcca
caatacggcctgcgtgaaggcaagtatttcctgtcgccggagcaggcccaggcaatcctt
gagctgcgtctgcaccgtttgaccggcctggagcacgagaagctgctggccgagtatcag
gagattctcaaccagatcggtgagttgatccgcatcctcagcagtgccgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgatgtgcgccgcacc
gaaatccttgatgcccgcctcgacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatctcccacggtggctatgccaagacccagccattggctgcgtaccaggcc
cagcgtcgcggtggtaaaggtaaatcggctaccggcgtgaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaaaacctacgaaattccggaagcgtcacgcgccgctcgtggtcgtccgctg
gtcaacctgctgccgctggacagtgatgaatacatcaccactatgctgccggtcgaggaa
tacaccgaaggtcatttcatcttcatggctaccgccaaaggcaccgtgaagaagactccg
ctggagtccttcagccgtcagcgcagtgtgggcctgatcgcccttgagctggacgaaggc
gatgtactgatctccgccgcgatcactgatggtgagcgtgaagtgatgctgttctccgac
ggcggcaaggtcacgcgcttcaaggagtccgatgttcgcgccatgggccgtaccgcccgc
ggtgtgcgcggtatgcgcctgccagaagggcagaagctgatttcgatgctgatcccggaa
gaaggcagtcagatcctgactgcttccgagcgtggttatggcaagcgtacggccatcagc
gagttcccggagtacaagcgtggcggtcaaggtgttattgccatggtcagcaacgatcgc
aatggccgtctggttggcgcggtccaggtgctcgatggcgaggaaatcatgctgatttcc
gaccagggcaccctggtacgtactcgtgtggctgaagtgtcgagcctgggccgtaacacc
cagggcgtgaccttgatcaagctggccaaggacgaaaaactggtcggcctggagcgtgtc
caggagccttcggaagttgaaggcgaggagcttgaaggtgaaggtttcgatggcgaggta
atcgcagcaggcgatgataacgtcgacgagccaaccctcgatgcggccgcagacgaagaa
gaaccgcaggaataa
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