Pseudomonas imrae: OQ460_11565
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Entry
OQ460_11565 CDS
T11325
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pim Pseudomonas imrae
Pathway
pim03030
DNA replication
pim03430
Mismatch repair
pim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OQ460_11565 (dnaQ)
03430 Mismatch repair
OQ460_11565 (dnaQ)
03440 Homologous recombination
OQ460_11565 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pim03032
]
OQ460_11565 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pim03400
]
OQ460_11565 (dnaQ)
Enzymes [BR:
pim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OQ460_11565 (dnaQ)
DNA replication proteins [BR:
pim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OQ460_11565 (dnaQ)
DNA repair and recombination proteins [BR:
pim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OQ460_11565 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XLY95656
LinkDB
All DBs
Position
2401555..2402292
Genome browser
AA seq
245 aa
AA seq
DB search
MRSVVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIGVHGIT
NEFLVGKPRFAEVADEFFAFIEGAQLIIHNAAFDVGFINNEFALMGQSDRADITRHCTIL
DTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLSLA
GNASDGNGSAEGSGNRPSEIRRLPVDRKPTAIIRASEQDMAEHAARLEAIAKSAGAPALW
SQLTQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atccgatctgttgtactcgataccgaaaccaccggcatgccggtgaccgatggccaccgg
atcattgaaattggttgtgtcgaactgataggccgccgcctgactggtcgccattttcac
gtgtacttgcagccggaccgcgaaagtgatgaaggcgccattggcgtccacggcattacc
aacgagtttctggtgggcaagccgcgtttcgctgaagtcgccgatgagtttttcgccttt
atcgaaggcgcgcagctgatcattcataacgcggcgtttgacgtcggcttcatcaataat
gaattcgccttgatggggcagtcggaccgggctgatatcacccgccactgcaccattctc
gacaccctgatgatggcccgcgaacggcaccccggccagcgcaacagcctcgacgctctt
tgcaaacgctatggcgtcgacaactccggtcgtgaactgcacggagctttgctcgactcc
gagattctggccgacgtttacctgaccatgaccggcggccagaccagcctgtccctggct
ggtaacgcttccgatggcaacggttcggcggaaggttcgggtaatcgaccttcggaaatc
cggcgcctgccggtcgaccgcaagcccacggcgatcatccgtgccagcgaacaggacatg
gccgagcacgccgcgcgtcttgaggccattgccaagtccgcgggcgcgccggcgttgtgg
agccaattgacccagtaa
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