Pseudomonas imrae: OQ460_13500
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Entry
OQ460_13500 CDS
T11325
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pim Pseudomonas imrae
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pim03400
]
OQ460_13500
DNA repair and recombination proteins [BR:
pim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OQ460_13500
Archaeal homologous recombinant proteins
OQ460_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
ABC_tran
nSTAND3
nSTAND_NTPase5
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
XLY91231
LinkDB
All DBs
Position
2869918..2873556
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDAETDISIGDPRTLIRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSEHLLASQKTEYKAQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGQRAFIKAKDAKEAHKLLQDQATGVTPLAPEARVELDQQLG
EAQQQLKARQARLKQLELQHTWLKELGEWQERQHSAAEQLQQAEQDWQAQDSQRLDLNRL
EQLAPQRHHFARQAELAQQLQPLALQIRQHLEQEAALRARQAQLQQQQGGAKDALGAALK
RQAEAAPLLRQAFEEHSNLARLTRDLSQSDEQKLLAEKSCSEGQAALNALHERQQQVVVR
LQQLAVQLEQSATLAPLGEAWGAYRDRLQQLMLIGNRLNKGQAELPALEQQAALALAQWT
QQRTTLDLLYQEAGAEPHAVAEQIQLLDSLLKDNRKQQRAFEELARLWETSQKLQDRYDD
LVAKQSLAKQQREEFNRIGVEAKAELAIAEHTLSVIQQLLERQRLARDVNVQTLREQLEP
DQPCPVCGSVEHPYHATDVLIVSLERHDEDEVTRARKAVDVLKDKMDGLRTELGELIAQQ
KELLRQQQQVATEQQTLAPSLETHPLSATLFNQEAAKRSAWLSQHLSQLNQSITQDEQRQ
GALLNLQQNAGRLQQQLQVAQDASQLARQQLVDQQRELANDRERREEALNAFADLLPADM
LEDLRHEPAATFMQLDRQISQRLEQLGQQQEELTEHQQRQQTIEKELDRQQHRQQQLEVL
VQQFVELNTQQQAAQARLAELLGTHASADHWQQQLDLSVEQARSSEAQASQQLQDTHNQL
IQLAADLKARQERQLALYTEQQALELRLHDWRVLHPDLDDEGLARLLSVDEQQAGELRQR
LQHGEKAVAQAKVLLHEREQRLKDHQAQHNGNLDAEQLDNALTELNGQLNDDEKTCAELR
ARQAEDQRRQDANQSLTLAIDKAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccattcgcctgaaaaacctggcttccctggcagggccctttgagatt
gattttactgccgaacccctggccagcgccgggctgttcgccatcaccggcccgaccggc
gccggtaaaagcaccttgctcgacgccctgtgcctggcgctgtttggcgccgtgcctcgg
ttgggagataccggccaggcgaaaatgcccgatgccgagaccgatatttccattggtgat
ccacgcaccctgattcgtcgcggcacgggcggcgggtatgccgaagtggatttcgtcggc
gtcagcggccgtcgctaccgcgcgcgctgggaggccaatcgcgcacgggacaaagccagc
ggcaaactgcaaaacagtcgacagagcctgatcgacctggacagcgaacacttgctggcc
agccagaaaaccgaatacaaagcccaactggaactggcgctgggcttgaatttcgagcag
ttcacccgcgcggtgctgttggcgcaaagtgagttcagcgccttcctcaaggccaacgac
aacgagcgcagcgaactgctggaaaagctcaccgatacagcgctctacacccagttgggc
cagcgtgcattcatcaaggccaaggatgccaaggaagcgcacaagttgctgcaggaccag
gccaccggcgtcaccccgctggctcccgaggcccgcgtcgagctggatcaacaactgggc
gaagcccagcaacagctcaaggcccgacaagcccggctcaagcagcttgaactgcagcac
acctggctcaaggaattgggcgaatggcaagaacgccagcacagcgccgccgagcaattg
caacaggccgagcaggactggcaggcccaggactcacaacgcctggacttgaaccgcctg
gagcaactggcgccgcagcgtcatcatttcgcgcgccaggccgagctggcccaacagttg
cagcccctggccctgcagatccgccagcatcttgagcaagaggctgcgctgcgcgcacgc
caggcacaactgcaacagcagcaaggcggcgcaaaagatgccctaggcgcagcgttgaag
cgccaagccgaggctgcaccgctgctgcgacaggccttcgaggagcacagcaacctcgcc
cgcctgacccgtgacctgagccagagcgacgagcaaaagctgctcgcggaaaaatcctgt
tccgaaggccaggccgctctgaacgccctgcacgaacggcaacagcaagtcgtcgtacgc
ctgcaacaactggccgtgcaactggagcaaagcgctacgctggcgccgttgggcgaagcc
tggggcgcgtaccgcgaccgtctgcaacaactgatgctgatcggcaatcgcctgaacaag
ggccaggccgaattacctgcgctggaacagcaggccgcgctcgccctggcgcaatggacg
cagcaacgcaccaccctggacttgctctaccaggaggcaggagccgaaccccatgcggtc
gccgagcagatccagttactggacagcctgctcaaggacaatcgcaagcaacagcgcgcc
ttcgaggaactggcgcggctatgggaaaccagccaaaagctgcaagaccgatatgacgac
cttgtggcgaagcagtcgttggccaagcaacagcgcgaagagttcaaccgcatcggcgtc
gaagccaaggcagaacttgccatcgccgaacacacgctctcggtgatccagcagttgctg
gagcgccagcgcttggcacgcgacgttaatgtgcagaccctgcgcgaacaattggagcct
gatcagccttgccccgtttgtggcagcgtcgagcatccgtatcacgccactgatgtgctg
atcgtcagccttgagcgtcacgatgaagatgaagtgacccgtgcacgcaaagccgtcgat
gtgctcaaggataaaatggatgggctgcgtaccgaactgggagagttgatcgcccagcaa
aaagaactattgcgccagcagcagcaggttgcaaccgaacaacagaccctggctcccagt
cttgaaacccacccactgtcagccacgttgttcaaccaggaggccgccaaacgcagtgcc
tggctgagtcagcacctgagccaattgaaccagagcatcactcaggacgaacaacgccag
ggcgccctgctcaacctgcaacaaaacgccggccgcctgcagcaacaactgcaagtcgcc
caggatgccagccaactggcccgccaacagttggtagatcagcaacgagaactggccaac
gaccgcgaacgccgcgaagaagcgctaaacgcctttgccgacctgctgccggctgacatg
ctcgaagacctgcgccacgagccggctgcaacgttcatgcagctcgaccggcagatcagc
caacgcctggaacaactcggtcagcagcaggaagagctgaccgagcatcagcagcgccag
caaaccatcgagaaagagctggaccgccaacagcaccgccagcagcaattggaggtgctg
gtgcagcaattcgtcgagttgaacactcagcaacaggccgcccaggccaggctggccgaa
ctgttgggcacacacgccagtgccgatcattggcaacagcaactcgacctgtccgtcgaa
caggcccgcagcagcgaagcccaggccagccagcagttgcaggacactcataaccaactg
atccaactggccgccgacctcaaggcccgccaagagcggcaactcgcactgtacaccgag
caacaggcacttgagctgcgcctgcatgactggcgcgttttgcatccggaccttgacgac
gagggcctcgcacgcctgctaagtgtcgacgagcagcaagccggcgagttgcgccagcgt
ttgcagcacggcgaaaaagccgtcgcgcaagccaaggtcctgttgcatgagcgcgagcag
cggctcaaggatcaccaggcccagcacaatggcaatctggatgccgagcagttggacaac
gcgctgaccgaactcaacggccaactgaacgatgacgaaaaaacctgtgccgagttgcgt
gcccgccaggctgaagaccagcgccgccaggacgctaatcagtctctgacgctcgcgatc
gacaaggcctacgacgaatggcagcgctgggcccgactcaatgcactgatcggctcggcc
accggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtacaccat
gccaacgtgcaactgcgccaactggtgcggcgctaccgcctcaaacgcggcggcagcatg
ctcggcttgctggtactggatacggaaatgggtgacgaactgcgctcggtgcattcgctg
tccggtggcgaaaccttcctggtgtccctggcgctggccctggggctggcatcgatggcc
tccagtacattgaagatcgagtcgctgtttatcgacgaaggttttggcagcctcgatcca
gagtcgctgcaattggcgatggatgcattggacggtttgcaggcacagggacgcaaagtc
gcggtgatttcccatgtacaggaaatgcatgaacggattcctgtgcagattcaggtcaag
cgccagggtaatggcttaagcaccctggaggtcaaatga
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integrated database retrieval system
