Pseudomonas imrae: OQ460_13930
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Entry
OQ460_13930 CDS
T11325
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
pim Pseudomonas imrae
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pim00536
]
OQ460_13930
Glycosaminoglycan binding proteins [BR:
pim00536
]
Heparan sulfate / Heparin
Microbial pathogens
OQ460_13930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Fil_haemagg
ESPR
Motif
Other DBs
NCBI-ProteinID:
XLY91307
LinkDB
All DBs
Position
complement(2967159..2975402)
Genome browser
AA seq
2747 aa
AA seq
DB search
MNKNLYRIVFNKARGLLMVVAENVLGSKKSSGTGTRTTPSAQVTVLTLRPLRFSLMAALG
LITLASPLAWADIVADRGAPGGQQPVVINAANGVPQVNIQTPSAAGVSRNAYSQFDVNAQ
GAILNNSRTNTQTQLGGWIEGNAHLGAGTARVILNEVNSSNPSQLRGYVEVAGDRAQVVI
ANPSGIACDGCGFINADRATLTSANVQMQDGQIQGYRVQGGRVVISGKGLDASQTDFTDV
IARSVEVNAGVWAKDLRVTSGANQVNADNTQATAIAGTGEKPQVAIDVAQLGGMYAGKIK
LVGTEAGVGVRNAGQIGSSAGDVVISADGRLGNSGQISSSQNLQVDSQLGIDNNGSLYSQ
GNSTLSTRGDIRNQGVIAAQQDLTLTARDIDNTSKSLLGAGVASDGKVTGSGSLRADANQ
TLKHQGAAIAAGDIQLAGAQLDMKASETAARNVTLTARSGAADLNGATLDAAGTLNASVS
QRLTTDNAKVNAGRVQVTAASLSNHKGEIVQVGKDQTSIAVTGALDNSEGRIASNAVDLS
LAGATLSNAKGKIEHAGSGKLSIRGQALNGTEGSLHSNGLLQLTVADAVLDGATTLARQI
QIDTHQLSNRQGQILQTGAGTLRITAQGLLDNTAGTVVSDSDVTLTADRVLNQAGSVQAA
VTGNLDVTAYTLLDNTAGKLASAKGTQLTAGQLLNAQGKITAGDSLSLTGGQLSNDGGTL
ASSGALSINASQLSNRQGTVGSVNGPLDLTVSQGAFDNRGGTVQAQQRVGILSQGLLNDD
GLINGAALRLDSNGQALSNQRGAIIGDAAVELLSGELNNQAGLIQAKGAMSINTHGHTLA
NTDSGTTNGILGQAEVNLTTGVLSNSGGFVGSKGDVVIEATTVDNLAGGVLSSEKSLLLT
SQGLDNRGGQLQSLGNARLDIGTGRVDNLGGLLRAGGTLTVGAGQLDNQQTQGANQGVEG
QSLDLSVAQLLNGAGAIRADQTLTLNASGQLDNSAGLISSSKQLSIRADQALLNRGGTLI
AGENLGLSSASLSGDGSVLSLGDATLNLGSGLVNTGKLQANGDLNLNLQGALDNQGAVQA
SKHVRVSSGVIENRVNGEISGAQVTLDVADTLTNRGLIDAQLTRINTQVLNNLGSGRIYG
DQVSIDARQLTNDVEDGRASVIAARGRLDIGAGTILNREHAMLFSAGDLFIGGSLDANGL
ATGQATLVQNASASIEALGALGLNSAELRNTNEHFSTHVVEVSREGLREFQHTGSPNRYR
PDQVSVYRDEVSHLASPEGRADNYNRYDFTRTTTQTQILTSDPGQILSGGSMLLTANSVF
NDKSRIIAGGTLTGNIGVLHNTEVTGQQTVTDNGTVSHLYRIHRKGRDRQGTSVSAYNPA
ASVSDIFLRPTQYQENTAHGGSGLQVGERLTSSVDQAAVGASGAAVNVGNGRTPGPVLEV
PALQGTQAGEVGESIRTGGIDVQVPDNSLFHLNPQVNPDYLVESDPRFTSYRSWLSSDYM
LDRLQLDPGLTLTRLGDGFYEQKLIREQIAQLTGRRFLDGYANDETQYRALLDSALTYAG
QWDLVPGVALSSEQMAQLTSDIVWLVKRDVKLADGSTTQALVPQVYVRVRDGDLDGSGAL
MAGNVVDLQLQGDLVNSGTIAGRSVLAISAENIQNLGGRLTGADVQVQARTDLNNLGGLI
DASTRLSALAGRDINMVSTTGDTESTQGRATQVSRVAGLFVSAPTGELVANAGRDINLSA
AQIVSAGKDGKTTVLAGNNINLGTVTETREQSVQWNSSNWRRDASRIDAGSVIQGEGEVR
LIAGNDLNSRGANVTSEQGAVLVSAGRDVNLSTSQSYNHVDEAHKVTGSNSLFSSKTTTT
RDTLTETRTQASTFSGDTTLVKAGNDVNVRGSNVVSSNGTTLVAGHDVNVLADTDLLSEQ
HSKEVKKSGLFSGGAIAVTIGSQQSSNKNRTDSQAAAPSTIGSTDGNVAIEAGNAYRQVG
SQVTAPQGDVDIAAKTVQILEARNQQHITQESKFKQGGLTITITNPVIDAVQTARRMKTA
SERTDDGRMKTLALVSTALGAGTGYMQYADDPAMAGGVNISISAGGSKSESKSEQTASIA
AGSTVLAGGDVNITASGAGKDSNLTVQGSQITAGRNANLKADGDIALLAAQNTTVQSTTE
KGSNASLGIGIAIGSQQTGISFNAGASQSRGKGEGADLAWTNTHVDAGNQVTLQSGGDTR
LKGAVVTGKQVTADVGGDFSVESLQDSSTYKAKQTTLGVGVSICVPPFCIGSSSLSVTQS
KGIQKANYESVVEQSGILAGDDGFEVRVKGNTDLVGGLIASNDKAIADGKNSLDTGSLTT
SDLHNSAKASADSSGITLSTDLVSQGMYGAGKALIGNAMDAGKAKDSSSGRTLSAVSGGN
ILITDAYRQQLLTGHDASQTVASLNRDTANAHLAAQRQDLEKLQRTAEAEQAIKNETFRQ
TTQYSDIAYNTMFKKDARMFELLLDADGKPLLDEQKNPRRRELNEEERRNLKASPEGIVY
VADNGIFNDEGAAAKYAYQHREVGSTNPQYFLWFPDTGNLVSELMVAGYQRVMDNDFWGL
TNSTEATRQLQLDYGKKGLHLDGHSRGTMTIGNAMQSILNLPDASGLLSNTTLKFFGAAY
NVFKADEQLSSLQNRDAVTDQAKREQMTVEYQIHNNDPVGTLGIMGGNPGTGGVIPPDSS
KLKELLNVFTGDTTVHSCYGAGVKSCTRYWTDSPGSLPATLRVPDKK
NT seq
8244 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacctctatcggatcgtcttcaataaagcgcgtggcctgctgatggtggtg
gctgaaaacgtgctgggaagcaaaaaatcctccggcacgggcacccgtaccacgccaagc
gcacaggtcacggtattgacgttgcgcccgctgcggttttcgttgatggcagcccttggt
ttgatcacattggcgtcgcccctggcctgggctgacattgtggcagaccgtggcgcgcct
ggagggcagcagccggtggtcatcaacgccgccaacggcgtgccccaggtcaatatccag
accccaagtgcggcaggtgtgtcgcgtaacgcctacagccagttcgacgtcaacgcgcaa
ggcgcgattctgaacaactcgcgtaccaacacccagacccaactcggcggctggatcgag
ggcaacgcgcatttgggtgccggcaccgcacgggtgatcctcaacgaggtcaacagcagc
aaccccagccaactgcgtggttatgtcgaagtcgccggtgatcgtgcccaggtagtgatt
gccaacccttctgggattgcctgtgacgggtgcggctttatcaacgccgaccgtgccaca
ttgaccagcgccaacgtgcagatgcaagacgggcagatccagggctaccgcgtgcaaggc
ggacgcgtggtgatttccggcaagggcctggatgcctcgcagaccgactttaccgacgtg
atcgcgcgctcggtcgaggtcaatgccggggtctgggccaaagacctgcgggttaccagt
ggcgccaaccaggtgaatgccgataacacccaggccacggcaattgccggtactggcgaa
aaaccccaggtggccatcgacgtcgctcaattgggtggcatgtatgccggcaagatcaag
ctggtgggcaccgaagccggagtgggcgtgcgcaacgccgggcagatcggttccagtgcc
ggtgacgtggtgatcagcgccgatggccgactgggcaacagtgggcaaatcagcagcagc
cagaaccttcaagtcgacagccaactgggcatcgacaacaacggttcgctgtacagccag
ggcaacagcaccttgtccactcgcggcgatatccgcaatcagggcgtgatcgccgcgcaa
caggacttgacgctgacggcgcgggatatcgacaacaccagcaagtcgctgcttggcgcg
ggcgtggcgagcgacggcaaggtgaccggcagtggttcgctgcgcgccgacgcgaaccag
acactcaagcaccagggggcggcgattgctgctggcgatatccaactggccggcgcgcaa
ctggacatgaaggccagtgagactgctgcgcgcaacgtcaccctgaccgcacgcagtggc
gccgccgacttgaacggtgcgacgctggacgccgcgggaaccctgaatgcctcggtgagc
caacgcctgactaccgataacgccaaggtcaacgccggtcgtgtgcaagtgaccgccgcc
agcctgtccaaccacaagggtgaaatcgtccaggtgggcaaagaccagacctcgattgct
gtcactggcgctctggataacagcgaggggcgtatcgccagcaacgcggtcgacctcagc
ctggccggcgccacactgtccaacgccaaaggcaagatcgaacatgcaggctcaggcaag
ctgagcatccgcggccaggcgctgaacggcaccgaaggttcgctgcacagcaacggtctg
ttgcagctcacggtggcggatgcggtactggatggcgcgacgaccctggcgcggcagatt
caaatcgacactcatcaactgtccaaccgtcagggacaaatattgcagaccggcgcgggc
accttgcgcatcaccgcccagggtctgctcgacaacaccgccggcaccgtggtcagcgac
agcgacgtgacgctgaccgcagatcgggtgctcaaccaggcaggctcggtgcaggctgcg
gttaccggcaacctcgacgtcacggcgtataccctgctggacaacaccgcaggcaaactg
gcgtcggccaagggcacgcaactgactgccgggcaattgctcaacgcccagggcaagatt
actgccggcgacagcctctcgctcacgggcgggcaattgagcaacgacgggggcacgctg
gcgtccagcggtgcgctgagcatcaacgccagtcagttgagcaaccgccagggcacggtg
ggctcggtcaacgggccgcttgacctgactgtcagtcaaggcgccttcgataaccgtggc
ggcacggtacaggcgcagcagcgtgtgggcattctcagccagggcctgctcaatgacgac
ggcttgatcaatggcgcggccctgcgcctggacagcaatggccaggcgttgtccaaccag
cgcggtgcgatcataggcgacgctgcggtggaactgctcagcggtgagttgaacaaccag
gccgggctgatccaggccaagggcgccatgagcattaatacccatggacacaccctggcc
aacaccgactcgggcaccaccaacggcattctaggccaggccgaggtcaatctcacaacc
ggggtgctgagcaacagcggcggatttgtcggcagtaaaggtgatgtggttatcgaggcc
actacggtcgacaacctcgctggcggtgtactgagcagtgaaaagtctctattgctgacc
agccaaggcctggataatcgtggcggccagttgcagagcctgggcaatgcgcgcctggac
attggtaccggccgcgtcgataacctcggcggcctgctgcgtgccggtggcaccctgacc
gtgggggcagggcagttggacaaccagcagacccagggtgccaatcaaggcgtcgagggc
cagtccctggacctgagcgtggcgcaactgctcaatggggcgggcgccattcgcgccgac
cagacgctgacgctaaacgccagcgggcaactggacaacagcgccgggctgatttcctca
agcaagcaattgtcgattcgcgccgaccaggcgttgcttaaccgcggcggtaccttgatc
gccggggaaaacctgggcctgagcagcgccagcctgagcggcgacggcagcgtgctgagc
ctgggcgatgcgactctcaacctgggttcgggcctggtcaatacgggcaagctgcaagcc
aacggcgaccttaacctgaacctgcaaggcgccctcgataaccaaggcgccgtgcaggcc
agcaagcatgtgcgcgtctccagtggcgtcatcgagaaccgcgtcaacggtgagatcagt
ggcgcccaggtgaccctggatgtcgctgacactttgaccaaccgtggcctgatcgacgcc
cagctcactcggatcaatacccaagtgttgaacaacctggggagcgggcgtatctacggt
gatcaagtgtcgattgatgcgcgtcagttgaccaatgatgtcgaggatggccgtgcgtca
gtgattgcggcccgtggccgactggacataggcgccgggacgattctcaaccgcgagcac
gcgatgctgttcagtgccggtgacctgttcatcggcggtagcctggatgccaacggcctg
gccacgggccaggcgactctggtgcagaacgcgagtgcgagcatcgaagcgctcggtgcg
ctgggcctcaatagtgcagagttgcgcaataccaacgagcacttcagcacccacgtggta
gaagtcagccgcgaagggttgcgagagttccagcataccggctcccccaatcgctatcgc
ccggaccaggtttcggtctatcgagatgaagtcagtcatttggcgagcccggaaggccgt
gcggataactacaatcgttatgacttcacccgcactacgacccagacccagatcctcacg
tcggaccctgggcagattctctccggcggctcgatgctgttgactgccaactcggtgttc
aacgataagagccggatcattgccgggggcacgttgaccggcaatatcggggtcttgcac
aacactgaagtcaccgggcagcagacagtgacggacaacggcactgtcagccatttgtat
cgtattcaccgcaagggccgtgatcgccagggcacttcggtgtcggcctacaacccggca
gcgagcgtgagcgatatctttctgcgcccgacccagtatcaggaaaacaccgcccatggt
ggcagtggcttgcaggtcggtgaacggctgaccagcagcgtcgatcaggccgcggtgggc
gcgagtggcgcagcggtcaacgtgggtaatggccgcacgcctggcccggtactcgaagtg
cctgcgctgcaaggtacccaggccggggaagtcggcgagtcgatccgcactggcggtatc
gatgtacaggtgccggacaacagcctgtttcacctcaatccacaggtgaacccggactac
ttggtggaaagcgatccgcgtttcaccagctatcgctcgtggttatcttccgattacatg
ctcgatcggctgcaacttgatccgggcttgaccctgacacgcctgggggatggtttctac
gaacagaagctgatccgcgaacagattgcccagcttaccgggcggcgtttcctcgacggt
tacgccaacgatgaaacccagtatcgcgcgttgctcgacagtgcgttgacctacgccggc
cagtgggacctggtgcccggagtggcgctgagttccgagcagatggcacagctgaccagc
gacatagtctggctggttaaaagggatgtaaaactggccgacggcagcaccacccaggcg
ttagtaccacaggtctatgtgcgggtgcgcgacggtgacctggatggttccggagccctg
atggcgggcaacgtggtggacctgcaactgcaaggcgacctggtcaacagcggcacgatt
gccggacgtagtgtgctggcgatctctgccgagaatatccagaacctgggtggccgtctg
accggcgccgatgtgcaggtgcaggcgcgcaccgacttgaacaacctcggcggcctgatc
gacgccagcacgcgcttgagcgcactggctggtcgagatatcaacatggtctccactacc
ggcgacaccgaaagcacccagggccgtgcgacccaggtatcgcgggtggccgggctgttt
gtctctgcgcccacaggtgaactggtggcgaacgctggccgcgatatcaacctcagtgcg
gcacaaatcgtcagcgccggcaaagatggcaagaccacggttctggccggcaacaacatc
aacctgggcaccgtcaccgagacccgtgagcaaagtgtgcagtggaactccagcaactgg
cgcagggacgccagtcgcatcgatgccggcagcgttatccagggcgaaggcgaggtgcgc
ctgatcgccggcaatgacctcaattcccgtggtgccaacgtcaccagcgagcaaggtgct
gtgttggtttcggcagggcgcgacgttaacttgagcaccagccaaagctacaaccatgtc
gatgaggcgcataaagtcaccggcagcaatagcctgttttccagcaagaccaccacgacc
cgcgacaccctgactgaaacccgcacccaggccagtaccttcagcggcgacacaacgctg
gtcaaggcaggcaatgacgtaaatgtgcgcggcagcaacgtggtctccagtaacggcacc
acgctggtggcggggcatgatgtgaatgtgttggccgacactgatctgctcagcgagcag
cattccaaagaggtcaagaaaagcggcctgttcagtggcggcgcgattgcggtgaccatc
ggtagccagcaaagcagcaacaaaaaccgcaccgacagccaggcggcggcgcccagcacc
attggttcgactgacgggaatgtcgcgattgaagccggcaatgcctaccgccaggtcggc
agccaggtcacggcgccccagggcgatgtggatattgcagccaagactgtgcagatcctt
gaagcacgaaaccagcagcacatcacccaggagagcaagttcaagcagggtggcctgacg
attaccatcaccaaccccgtgatcgatgccgtgcagactgcccgaaggatgaaaaccgct
tccgagcgcactgacgatggtcgcatgaaaaccctggccctggtcagcaccgcactgggc
gccggcaccggctatatgcagtatgccgacgatccagccatggctggcggagtcaacatc
agtatttctgctggcggcagcaagagcgaaagcaaaagcgagcagaccgccagcatcgcg
gcaggctcgacggtcctggccggtggtgacgtgaatatcaccgccagtggcgccggcaaa
gacagcaacctgacggtacaaggcagccaaatcactgccgggcgcaatgccaatctcaag
gcggacggcgacattgccttgctggcggcgcaaaataccaccgtgcaaagcaccaccgaa
aaaggcagcaacgccagcctcggcatcggcattgccatcggcagccagcaaaccggtatc
agctttaacgccggcgcttcgcagagccgaggcaagggggagggcgctgatctggcctgg
accaatacccatgtggacgccggcaatcaagtcacgctgcagtctggcggcgatactcgg
ctcaagggcgcggtggtcaccggcaagcaagtcactgcggatgtgggcggcgatttcagt
gtcgaaagcctgcaggacagcagcacctacaaggccaagcaaactaccctcggtgtcggt
gtgagcatctgcgtaccgccgttctgcattggttcctcgagcctgagcgtcacccagagc
aagggcatccagaaggccaactatgaaagtgtcgtcgaacaaagcggcattctggccggc
gacgatggttttgaggttcgggtcaagggcaataccgacctggtaggcggcttgatcgcc
agcaacgacaaggccattgccgatggcaagaacagcctggacaccggctcgttgaccacc
tctgatctgcacaacagcgccaaggccagtgccgacagcagcggtatcaccctgagcacc
gatctggtttcccaagggatgtacggcgcgggcaaagccttgatcggcaatgccatggac
gccgggaaggcgaaggattcttccagcggtcgcaccttgagcgcggtcagcggtggcaac
atcctgatcaccgatgcttatcgccagcaactgttgaccgggcatgatgccagccagacc
gtcgccagcttgaaccgcgacaccgccaacgcgcacctcgcggcgcagcgccaggacctg
gaaaaactgcaacgcaccgccgaggctgagcaggcgatcaagaatgaaaccttccgccag
acgacgcagtacagcgatatcgcctataacaccatgttcaagaaagacgcgcgcatgttt
gaactgctgctggatgccgatggcaaaccgctgttggatgaacaaaagaacccgcgccgc
cgcgagttgaatgaggaagaaaggcgcaatttgaaggccagccctgaaggcatcgtttac
gtggccgacaacgggattttcaacgacgaaggcgcggctgccaaatatgcgtaccaacat
cgtgaagtcgggtccaccaacccgcaatatttcctctggttccccgatactggcaacctc
gtgtcggagctgatggtcgccggttaccagcgggtcatggacaacgacttctggggcctg
accaactccaccgaggccacgcgccaattgcagctcgattatggcaagaagggcctgcac
ctcgatggccacagccgcggcaccatgactatcggcaacgccatgcagtcgatcctcaac
ctgccggatgccagtggcctgttgagcaataccaccctgaagttcttcggcgcggcctat
aacgtgttcaaggccgacgaacaactgagctccctgcaaaaccgtgacgccgtcaccgat
caggccaagcgtgagcaaatgaccgtggaataccagatccataacaatgacccggtcggt
accttgggcatcatgggcggcaatccgggcacgggcggggttattccgcccgatagcagc
aagctcaaggagctgctgaacgtgttcaccggcgatactacggtgcacagttgctatggc
gccggggtcaaatcatgcacgcgctactggaccgattcgccgggctcccttccggctacg
ttgcgagtgcccgataaaaaataa
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integrated database retrieval system
