Pseudomonas imrae: OQ460_14995
Help
Entry
OQ460_14995 CDS
T11325
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pim Pseudomonas imrae
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pim03000
]
OQ460_14995
Transcription factors [BR:
pim03000
]
Prokaryotic type
Helix-turn-helix
Other families
OQ460_14995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
MimR_N
nSTAND6
AAA_2
PAS
AAA
AAA_3
HTH_7
AAA_7
Mg_chelatase
HTH_10
HTH_22
HTH_23
AAA_16
nSTAND3
HTH_20
AAA_14
DUF2089
HTH_11
HTH_psq
MCM
HTH_28
HTH_Tnp_1
DUF815
Motif
Other DBs
NCBI-ProteinID:
XLY91495
LinkDB
All DBs
Position
3192948..3194771
Genome browser
AA seq
607 aa
AA seq
DB search
MAAPAPLLPHDTIIQDSWRRCRAFGLDHQSTPSFDQLPAEGISQLLERQHSLVQTTHQEV
LPYYENILSNSNCLIMLADHQGQVLTSWGTQRFIDPKLSRGFSAGASWLERSSGTNAIGT
ALACAQAVHIEHDEHFLKANRFMTGSAAPIFDAHREIIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNLFGGEHFQLTFNTGLNNLDSQWAGLLIFDESGQVLSANRRADNLLGIS
LSRVMIDSLFKVSLLELLNQPEGLPFALQAAGRNRFQCLLKRPRQTPVQARVFAQPVPAA
PAVISLKSLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRNQQA
FIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQA
RLLRVLQERCVQPVGSSELFPVDLRIISATNRSLREQVLIGRFREDLYYRIGGLTLELPP
LRERSDKQALFKQLWQQHREPTQWAGLSAEVLALFEQHPWPGNLRQVSSVMQVALAMAED
QPIRPEHLPDDFFVDLGQPTPIMQMAPLDETQNLNQRLDAVGGNISHLARELGVSRNTLY
KRLRAAT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacccgccccgctgttgccacacgacaccatcatccaggactcctggcgccgc
tgccgtgccttcggcctggatcaccagagcacgccgagcttcgatcaactgcccgccgaa
ggcatcagccaattgctggagcgccagcattcgctggtgcagaccactcatcaggaagtg
ctgccctattacgaaaacattctcagcaattccaattgcctgatcatgttggccgaccat
caaggccaggtactgacctcttggggcacccaacggtttatcgaccctaaactgtcccgt
ggtttcagcgccggggccagttggctggagcgttcaagcggcaccaatgccatcggcacc
gccctggcctgtgcgcaggccgtacatatcgaacatgacgagcacttcctcaaggccaac
cgtttcatgaccgggtcggcggcgccgatctttgatgcccaccgcgaaatcattgcagtg
ctggatgtgtccagcgacagctatctgccgccctcccacacccttggcatggtcaagatg
atgagccagaccgtggaaaaccggctgatcctcaacctgtttggcggtgagcatttccag
ctgaccttcaataccggcctgaacaacctcgacagccaatgggcgggcctgctgatcttc
gatgaaagcggccaggtgctatcagccaaccgtcgcgccgacaatttgctcggcatcagc
ctgtcgcgggtcatgatcgacagcctgttcaaagtgtccttgctggagctgctcaatcaa
cccgaaggcctgccgttcgcgctacaggctgccggacgtaatcgctttcaatgcctgttg
aagcgccccaggcaaacaccagtccaggcccgggtcttcgcgcagccggtacctgccgca
ccggccgtcatcagcctcaagagcctgcattttggcgacagtcgcgtggaaaaagccgtg
cgccaggccgagcgtctactggaaaaagacatcccgctgttgattcatggagaaaccggg
gtaggcaaggaagtcttcgtcaaggccctgcaccaagccagttcccgcaatcaacaagca
tttatcgcggtcaactgtgcggcaattcctgcagagctggtggaatcggagttgtttggc
tacgaaaaaggcgcgttcaccggtgccaaccagaaaggtagcatcggcctgatccgcaag
gctgacaagggcacgctgtttctcgatgaaatcggtgatatgcccttgcccacccaggcc
cgactgttgcgggtattgcaggagcgttgcgtacagccggtgggcagcagcgaattgttc
ccggtggacctgcgcattatctcggccaccaatcggtcgctgcgcgaacaggtgttgatc
ggacgtttccgcgaggatctgtactaccgcatcggtggcctgaccttggaactgccacca
ttgcgcgagcgcagcgacaaacaggcactgttcaagcaactctggcaacagcaccgcgaa
cccacgcaatgggccgggctcagcgccgaggtattggccctgttcgaacaacatccgtgg
ccgggcaatctgcgccaggtcagcagcgtgatgcaggtggcgctggcgatggccgaggat
caaccgatccgcccggagcatctgccggatgatttttttgtcgacctgggacagcccacg
cccattatgcaaatggcccctctggacgagacccagaacctgaatcaaaggctggacgca
gtcggcggcaatatctcgcatctggcgcgggagctaggggtaagtcgtaatacgttgtac
aagcgattacgtgctgccacatag
DBGET
integrated database retrieval system
