Pseudomonas imrae: OQ460_17775
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Entry
OQ460_17775 CDS
T11325
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pim Pseudomonas imrae
Pathway
pim02020
Two-component system
pim02025
Biofilm formation - Pseudomonas aeruginosa
pim02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OQ460_17775 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OQ460_17775 (fliA)
09142 Cell motility
02040 Flagellar assembly
OQ460_17775 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pim03021
]
OQ460_17775 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pim02035
]
OQ460_17775 (fliA)
Transcription machinery [BR:
pim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OQ460_17775 (fliA)
Bacterial motility proteins [BR:
pim02035
]
Flagellar system
Flagellar assembly proteins
Stator
OQ460_17775 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
XLY91990
LinkDB
All DBs
Position
complement(3759236..3759976)
Genome browser
AA seq
246 aa
AA seq
DB search
MTASGYNLYKKSARDSQGELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRSIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHLEPSRDLEDE
RFQSALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacagccagcggctacaacctttacaagaagtcggcacgtgacagtcaaggcgagttg
atcgagcgctatgcgcctctggtcaagcgcattgcctatcacttgctggcgcgcttgccc
gccagcgtccaggtcgaagacctgatccaggcgggcatgatcggcctgctcgaagtgtcg
accaagtacgacgcgagcaaaggcgcgagtttcgagacgtacgcgggaattcgtatccgc
ggggcgatgctcgatgaagtgcgtaaaggtgattgggcgccgcgttcggtacaccgcaat
acccggatggtcagtgatgccattcgctcaattgaagcaaaaaccggtcgcgacgctaaa
gatcatgaagttgcggccgaactccaattgagtctcgatgattactacgggattttgaac
gataccttgggcagccgcttgttcagtttcgacgacctgttgcaggacggcgaacacgaa
gggttgcacgaggacggcgcgagtgcccatctcgaaccgtcgcgcgatctggaggacgaa
cgtttccagagtgcgttggcggacgcgattgccaatctgccagagcgtgagcggctggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggtgtc
agcgagtcgcgggtcagccagttgcacagccaatgcgcggcccgtttgcgcgggcgtttg
ggagaatggcgcgcgcgctga
DBGET
integrated database retrieval system
