Pseudomonas imrae: OQ460_18770
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Entry
OQ460_18770 CDS
T11325
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pim Pseudomonas imrae
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pim03009
]
OQ460_18770
Enzymes [BR:
pim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
OQ460_18770
Ribosome biogenesis [BR:
pim03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OQ460_18770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
XLY92177
LinkDB
All DBs
Position
3964168..3964860
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AA seq
230 aa
AA seq
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MRIDRFLSNLPRFNRQQVRLLLVERRIKVNGQVVSDPRHEVRAFSRVECDGELLQAGKPA
RYFMLHKPQGCVSATLDPQHRTVLDLLNEPDKGELHIAGRLDFNTTGLLLITNDGQWSRR
LTQPLTKLPKVYYVETEQPIEPAYAATFAAGLYFAFENLTTQPADLQVLSPTSARLSIVE
GRYHQVKRMFGHFDNKVTRLHRERMGPLVLDESLAPGQYRPLTDDEIRQI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgaccgcttcctcagcaacctgccgcgcttcaatcgccagcaagtacgcttg
ctgctggtcgagcggcggatcaaggtcaatggccaagtggtcagcgatcctcgccacgag
gtacgggcattcagtcgcgtggagtgcgacggcgaactcctgcaggccggcaagcctgcg
cgctacttcatgctgcacaagccccaaggttgcgtcagtgccacccttgacccgcaacac
cgcaccgtcctcgatctgctgaatgaacctgacaagggtgaattgcatatcgccggccgc
ctggacttcaataccaccggcctgctgttgatcaccaacgacggccaatggtcccggcgc
ctgacccagccgctcaccaagctgcccaaggtctactacgtcgagaccgaacagcctatt
gagcccgcatatgcggccacgtttgccgccggcctgtacttcgcattcgaaaacctcacc
acccagcccgccgatctgcaggtgctcagccccaccagtgcgcgcctgagcatcgttgag
gggcgctatcaccaggtcaagcgcatgttcgggcacttcgacaacaaagtgacgcgcctg
catcgcgaacgcatgggcccgctggtgctggatgaaagccttgcgcccggccagtatcgc
ccgctgacggatgacgaaatccggcaaatatga
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