Pseudomonas imrae: OQ460_19075
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Entry
OQ460_19075 CDS
T11325
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pim Pseudomonas imrae
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pim03021
]
OQ460_19075 (rapA)
Transcription machinery [BR:
pim03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OQ460_19075 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XLY92234
LinkDB
All DBs
Position
4026021..4028867
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DTITHFEGWKMTVREVDDVDGLLVYHGLNGQNEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASAEYRLVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDVKAFRAESENYRPVAEAVQELMDK
GRLSPAAHKTIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPCPDEYLELPLGEHAELYPEVSFQSQPDIEEEQRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEDADDGEWQALIDEARAERERLE
AELHTGRDRLLELNSGGAGEGDALVEEILEQDDQFTLPIYMETLFDAFGIDSEDHSDNAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRALQLGRYLPPAALRCLLDANGNDLSGRVSF
TTLNDQLESVPRASANKFVQAQRDQLTPRINAGEEKIAPRHAERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRESELVALRKQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacgggcgcttgttgaccgtgctctatccggccactggc
gacacccgccagtacgcgctacggaatgcgcccctcactcgcgtaagattttcaccaggt
gacaccatcacccatttcgaaggctggaaaatgaccgtgcgcgaagtcgacgatgtcgac
ggcctgctggtctatcacggtctcaatgggcagaacgaacaggtcaccctgccggaaacc
caactgtcgaacttcatccagttccgcctggccagcgaccgactgttcgccggccagatc
gacccactggcctggttctccctgcgctaccacaccctggaacacaccagccgccaacta
cagtcctcgctctggggcctgggtggcgtgcgtgcgcagccgatcgctcaccaattgcac
attgcccgcgaggtcgccgaccgtatcgccccccgggtattgctggcagacgaagtaggc
ctgggcaagaccattgaagccggcctggtgatccatcgccagttgctctccggccgggcc
aaccgcgtgttgatcctggtcccggaaaacctgcaacaccagtggctggtagaaatgcgc
cggcgcttcaacctgcaagtcgcgctgtttgacgaagagcgctttattgaaagcgacgcc
agcaacccgttcgaagacacccagctcgcgctggtcgccctggaatggctggtagacgac
gagaaagcccaggatgcgctgttcgccgccggctgggacttgatggtcgtcgatgaggca
caccacctggtgtggcacgaagaacaagccagcgctgaatacaggctggtggagcaactg
gccgaaaccattcccggtgtcctgctgctgactgcaaccccggagcaactgggccaagac
agccacttcgcgcgcctgcgcctgctggacccaaaccgtttccacgacgtcaaggccttc
cgcgccgagagcgagaactatcgcccggtggccgaagccgtccaggaactgatggacaag
ggccgcctctcgcctgctgcccacaagactatccagggtttcctcggcaacgaaggcgaa
gccttgctgaccgcggtcaacgatggcgacaccgaagccagcgcccgcctggtgcgtgaa
ctgctggaccgccacggcaccggccgcgtgctgtttcgcaatacccgcgccgcggtacaa
ggtttccccgagcgcaagctgcatgcgtacccgctgccatgcccggacgagtacctcgaa
ctgccgttgggtgaacacgccgagttgtatccggaagtcagcttccaatcgcagccggac
attgaagaagaacagcgttggtggcgcttcgacccacgggtcgaatggctgatcgaccag
ttgaaaatgctcaagcgcaccaaggtcctggtgatctgcgcccatgccgagaccgccatg
gacctggaagacgccctgcgcgtgcgttccggcatcccggccacggtgttccacgaaggc
atgaacatcctcgagcgggaccgtgccgcggcctacttcgccgatgaagagttcggcgcg
caagtactgatctgctcggaaatcggcagtgaaggtcgcaacttccagttcgcccaccat
ctggtgctgttcgacctgccgtcccacccggacctgctggaacagcgaatcggccgtctc
gaccggatcggacagaagcatgtaatcgaactgcatgtgccttacctggaaaccagcccg
caagagcggttgttccagtggtaccacgaggcgctgaatgccttcctgaacacctgcccg
accggcaacgccctgcaacatcagttcggcccgcgcctgctgccgctgctcgaagacgcc
gacgacggtgagtggcaagcactgatcgacgaagcccgcgccgagcgcgagcgcctcgaa
gccgagctgcacaccggtcgcgaccgcttgctggagctcaactccggcggtgctggcgaa
ggtgatgcgttggtggaagagattcttgaacaggacgaccagttcaccttgccgatctac
atggaaaccctgttcgatgcgttcggcatcgacagcgaagaccattcggacaatgcgctg
atcctcaaacccagcgaaaaaatgctcgacgccagcttcccgctgggcgatgacgaaggc
gtgaccattacctacgaccgcaaccaggcgctgtctcgcgaagacatgcagttcatcacc
tgggaacacccgatggtccagggtggcatggacctggtgctgtccggttcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagccgggcacagtgttgctggaactg
ctctacgtcagtgaagtggtagcgccgcgcgcgttgcaactgggtcgctacttgccgccg
gcagcgctgcgctgcctgttggacgccaacggcaatgacttgtcgggccgagtgtcgttc
accaccttgaacgatcagctggaaagcgtgccacgggccagcgctaacaagtttgtgcag
gcccagcgcgatcaactgacgccacggatcaacgccggcgaagaaaaaatcgccccacgt
cacgccgaacgcgtggccgaggcgcaacgccgcctggctgccgataccgacgaagaactg
gcgcgcctgactgcgctgcaagcggtcaacccgactgtgcgtgagagcgagctggtcgcg
ttgcgcaagcaacgtgagcaaggtttggccatgctcgataaagcggcgctgcgactagag
gcgattcgcgtactggtcgcgggttga
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integrated database retrieval system
