Pseudomonas imrae: OQ460_19800
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Entry
OQ460_19800 CDS
T11325
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pim Pseudomonas imrae
Pathway
pim02024
Quorum sensing
pim03060
Protein export
pim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OQ460_19800 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OQ460_19800 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OQ460_19800 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pim02044
]
OQ460_19800 (ffh)
Enzymes [BR:
pim01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OQ460_19800 (ffh)
Secretion system [BR:
pim02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OQ460_19800 (ffh)
Eukaryotic Sec-SRP protein
OQ460_19800 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
AAA_33
APS_kinase
YqeC
AAA_19
AAA_30
ATP_bind_1
AAA_16
AAA_31
Helicase_RecD
ABC_tran
KTI12
Thymidylate_kin
AAA_5
nSTAND3
AAA_24
TsaE
6PF2K
AAA_14
NACHT
Motif
Other DBs
NCBI-ProteinID:
XLY92370
LinkDB
All DBs
Position
complement(4182596..4183972)
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKVVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTVGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLEMLAGEVGVTFFPSDLSQKPVDIANAAIKEAR
LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMMPGRGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgactgaccgtctctcgcagacgctgcgccatgtcactggcaaggcc
aagctgaccgaggacaatattaaagacactctgcgcgaagtgcgcatggcgttgctggaa
gccgacgttgccttgcctgtggtcaaggacttcgtcaattcggtcaaggaacgtgcggtt
ggcaccgaagtgtcccgcagcctgacgccgggccaggcctttgtgaaggtcgtccaggcc
gagcttgaaagcttgatgggcgctgccaacgaagacttgaacctcagcgccgtgccgccg
gccgttgtgttgatggcaggtttgcagggtgcaggtaaaaccaccaccgtcggcaaactg
gcgcgcttccttaaagagcgcaagaagaagtccgtgatggtggtgtcggctgacgtttat
cgtccggctgcgatcaaacagctggaaatgctcgccggcgaagtcggcgtgacgttcttc
ccgtccgacctgagccagaagccggtcgacatcgccaacgctgccattaaggaagccagg
ctcaaattcatcgacgtggtgatcgtcgataccgccggtcgcctgcacatcgacgaagag
atgatgggcgagatcaaggcgctgcatgccgcgatcaatccggtcgagacgctgttcgtg
gtcgatgccatgaccggccaggatgcagccaacactgccaaggcatttggtgatgcactg
ccgctgacgggcgtgatcctgaccaaggtcgacggtgatgcgcgtggcggtgctgcgttg
tcggtccgcgcgatcaccggcaagccgatcaagttcatcggtatgggtgagaagagcgaa
gcgctcgagccgttccaccccgagcggatcgcctcgcggatccttggcatgggcgacgtg
ctcagcctgatcgagcaggccgagcagaccctcgacaaagacaaggccgacaaactggcc
aagaagctgaagaagggcaagggcttcgacctcgaagacttccgtgatcagttgcaacaa
atgaagaacatgggcggtctcggcggcttgatggacaagctgccgaacatcggcggtgtg
aacctggcgcagatgggcaatgcccagggcgcggcagagaagcagttcaagcagatggaa
gccatcatcaactccatgacgccggccgagcgccgtgaccctgagctgatcagtggttcg
cgcaagcgtcggatcgccatggggtccggcactcaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaagttctctgccaaaggcggcatggcc
aagatgatgcgtggcatgggcggaatgatgcccggtcgcggcatgccgaagatgtaa
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