Pseudomonas imrae: OQ460_20185
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Entry
OQ460_20185 CDS
T11325
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
pim Pseudomonas imrae
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
IstB_IS21
OKR_DC_1_N
AAA_22
MCM
TIP49
HTH_24
AAA_18
AAA_7
TP_0454_N
nSTAND3
APS_kinase
AAA_30
AAA_2
Motif
Other DBs
NCBI-ProteinID:
XLY92444
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Position
complement(4266073..4267470)
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AA seq
465 aa
AA seq
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MTHNVLVVDDEPKLCDLLSSALSQNGIQVFTAGNGLHALKVLEQEDIDLVISDWRMPGMD
GPQLLAEIKVRYPQVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQF
RDIVRDNARLRAELDEHAQIDSLVGDSPAFRRVLQSVDSVCESNATILLTGESGTGKEMV
ARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDL
YYRLNVFPIPLPALRERVEDIAPLARHFARTLSANSGKRITGFSPEALQAMAAYTWPGNI
RELQNCVERATIVAASSVIEDIDLPAYLFASTPADRDVTAILSDGPGVPHDLDAALAEVE
KAYIMAALQESNGVQAAAAQRIGISERSFWYRLKKLGIQVDKIVR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataacgtattagtggtggacgacgagcccaaactctgcgacctgctgtcgtcg
gccctgagccagaacggtatccaggtattcactgcgggcaatggtttgcacgcgctcaag
gtactggagcaggaagacatcgacctggtgatcagcgactggcgcatgccgggcatggac
ggcccgcaactgctggcggaaatcaaggtgcgttacccgcaggtgccggtgatcgtgatg
acggcctacagcacggtgaaaaacgccgtgcaatcgatgcgcaatggcgcctacgactac
attgccaaacccttcgatatcgatgagctcgacatcactgtagccaaggccttgcagttt
cgcgacatcgtgcgtgacaacgcgcgattgcgcgccgagctcgatgagcacgcgcagatc
gacagtctggtgggtgacagcccggctttccggcgcgtcctgcagtcggtggattcagtg
tgcgaaagcaatgcaactattctgctgaccggcgaaagcggcactggcaaggaaatggtc
gcccgcgctatccacaaacacggcaatcgtgccgataagccttttgttgcggtcaattgc
gcggcgatcccggaagggttgctggaaagcgaaatgtttggccatcgcaaaggcgcgttt
accggcgctgtggccgatcgggtaggccgcttcatgcaggccgacaagggcacgttgttt
ctcgatgaagtgggcgacatgcccctggcgttgcaggccaagatcctgcgtgccttgcag
gagcgggtgatcgagccggtgggtgatcccagggagcgtaaggtagacgtacgggtcatc
gctgccaccaacaagaacctgctggaagcggtggccaacaaggaatttcgcgaagacctt
tattaccgtctcaacgtgttcccgatcccgctgccggcgttgcgtgagcgcgtggaagac
atcgcacccctggcccggcactttgcccggaccttgagcgccaattcgggtaaacgcatc
accggtttcagccccgaagccttgcaggccatggccgcctatacctggccgggaaatatt
cgcgagctgcagaattgcgtggaacgggcgacgattgttgcggccagttcggtgattgaa
gacattgatctgccggcgtacctgtttgcttcaacgcctgccgatcgcgatgtgacggcg
atcctcagcgatggcccgggtgtaccccatgacttggatgcggcgctggcggaggtggaa
aaagcctacatcatggcggcgctgcaggagagcaacggcgtgcaggcggctgcagcgcaa
aggatcgggatatcggagcgcagtttctggtatcggttgaagaagttggggattcaggtg
gataagattgtgcgctga
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