Pseudomonas imrae: OQ460_22270
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Entry
OQ460_22270 CDS
T11325
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pim Pseudomonas imrae
Brite
KEGG Orthology (KO) [BR:
pim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pim03000
]
OQ460_22270
Transcription factors [BR:
pim03000
]
Prokaryotic type
Helix-turn-helix
Other families
OQ460_22270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
PAS_4
AAA_5
HTH_23
HTH_7
AAA_2
HVO_A0261_N
HTH_30
HTH_50
PAS_9
HTH_28
HTH_22
PAS_8
PAS
AAA
HTH_17
RWP-RK
PAS_7
IclR_C
HTH_20
HTH_AraC
nSTAND3
Mga
Motif
Other DBs
NCBI-ProteinID:
XLY92829
LinkDB
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Position
complement(4726448..4728358)
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AA seq
636 aa
AA seq
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MHNDHFSRHAQQVLTVTRGQDPLHGPGSDPSIARSWLRCLEDYHLDPALTIAPTVLEHGR
LLESRERLQQVLHIAGNEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPSERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQALTIHRDEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSAREAVSRQSQFHTMALVNLSAKMIESCYFLRHFEHHWLLRFHLQAESVGLFSEGLLA
FDGEGRICALNQSAQNLLGQPRGRLLGLAVEMFFDCTLDELLGRASANASASWPLRTRDG
RNLFAVLRGEQRRTPSPTVPAPAKVLRPRWPGICLGDTALQDDFRKALRVFERDVPLLIN
GETGSGKEAFAKAVHHASQRAEHAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRG
KLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRLVVPIGGEPQAVNVRVVSATHRNLLER
VKGGSFREDLYYRLNGLEIALPPLRERSDKSQLLDFILAEEAGEQVVQLDRAARQALLTF
NWPGNVRQLRTVLRTLAALCDEGQVGLEDLPVMIRQARPTPTAVDEPTDSPLHDAERLAL
LNALEQQRWHMSHTAEQLGVSRNTLYRKLRKHGIAR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgatcatttcagtcgccatgcccagcaagtactgaccgtgacccgcggccag
gatccgctgcacgggcccggcagcgacccttcgattgcccgttcctggctgcgttgcctt
gaggactaccacctcgacccggcgctgaccatcgcgcctacggtgctggagcacggtcgt
ctgctggaaagccgcgagcgcctgcaacaggtgctgcacattgccggcaatgaaatgaac
agcctgcatcaacagctctcgggcgccggtcacgcggtactgctgaccgatgcccgaggg
gtgatcctcaattgcgtcaccgcccccagcgagcgcaagattttcgagcgcgccggactg
tggctcggcgccgactggagcgaggcctgcgaaggtaccaacggtatcggcacctgcctg
gtggagcgccaggccctgactattcatcgtgacgaacactttcgcggtcgacataccggg
ctgacctgctccgcgagcccggtgttcgatcctcatggcgaactgctggcggtgctggac
gtgtcctcggcccgcgaagctgtttcccggcagagccagttccataccatggcattggtc
aacctttcggcgaagatgatcgaaagttgctatttcctgcgtcacttcgaacaccactgg
ctgctgcgttttcacctgcaggccgagtctgtggggctgttcagcgaagggctgctggcg
ttcgacggtgaagggcggatttgcgccctcaatcaaagtgcgcagaacctgctgggccag
ccacgcggacgtctgctcgggctggcggtggagatgtttttcgattgcactctcgatgag
ctgctcgggcgtgccagtgcaaatgccagcgccagttggccgctgcgcacgcgtgatggg
cgcaacctgtttgcggtgttgcgcggcgagcagcgtcggacgccgagcccgactgtgcct
gcgccggcgaaggtgctgcggccacgctggccgggtatctgtctgggtgacacggcgctg
caagacgattttcgcaaggccttgcgggtgtttgagcgcgacgtgccgctgctgatcaat
ggcgaaaccggctccggcaaggaagcctttgccaaagccgtgcatcatgccagccagcgc
gctgagcacgcgttcgtcgccctgaactgcgcggcgatcccggaaagcctgatcgagagc
gagctgttcggttatcgcggcggcagtttcaccggggcgcgcaaggaaggcatgcgcggc
aagttgcaacaggccgacggtggcactttgttccttgatgaaatcggcgatatgccgctg
gccttgcagacccgtcttttaagggtattggaagaccgtcttgtggtgcccataggcggc
gagccgcaggcggtcaatgtcagggtggtcagcgcgactcaccgtaacttgcttgagcga
gtcaagggcggcagctttcgcgaagatttgtactaccggctcaacggtctggaaatcgcc
ttgccacctctgcgcgagcgcagcgacaaatcgcagttgctcgattttatcctcgcggag
gaagcgggcgagcaagtggtgcaactggatcgcgcggcgcgccaggccctactgaccttt
aactggccgggcaacgtgcggcagttgcgcacggttctgcgtaccctggccgccctgtgt
gacgaaggccaggtcggcctcgaggatttgccggtgatgattcgccaggcccggcccacg
ccgacagccgtcgatgaaccgacggactcgccgctgcatgatgccgagcgcctggcgctg
ctcaacgccctggagcaacagcgttggcacatgagccatacagcggagcaactcggggtc
agtcgcaatacgctgtatcgcaagctgcgtaaacatgggattgcccgctga
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