Psychromonas ingrahamii: Ping_0265
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Entry
Ping_0265 CDS
T00450
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03030
DNA replication
pin03430
Mismatch repair
pin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ping_0265
03430 Mismatch repair
Ping_0265
03440 Homologous recombination
Ping_0265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pin03032
]
Ping_0265
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_0265
Enzymes [BR:
pin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ping_0265
DNA replication proteins [BR:
pin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ping_0265
DNA repair and recombination proteins [BR:
pin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ping_0265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CAF1
Rv2179c-like
HP1454-like_middle_dom
DEDDh_C
RNase_H_2
UBA_7
Motif
Other DBs
NCBI-ProteinID:
ABM02132
UniProt:
A1SRL7
LinkDB
All DBs
Position
347145..347831
Genome browser
AA seq
228 aa
AA seq
DB search
MFKQWWLQYKLKRLIKNSKLAALKAHYQYLLTQLNRPIAEATLLALDIEMTGLDPKKDQM
VSIGIIPIINAKIQPEFAQHKLIKIQGSVGQSAVIHGVLDKDLADALPLEEALQWLFEQC
KDKVLVAHHAQLDLQFLQQSLSKSGAHSFSMLAIDTLIIEKERELRKHQVLKTGSLRLNA
CRDRYNLPIYNAHNALTDALACAELLLAQLNQMGGLDNITLVQLLTKR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacaatggtggttacagtacaaattaaaacggctgattaaaaatagcaaactc
gccgcgctaaaagcacattatcagtatctgttaacacagcttaatcggccgattgctgaa
gctacgttattagcattagatattgaaatgacaggcttagatcctaaaaaagatcagatg
gtcagtattggaattatccctattatcaatgctaagattcaacctgaatttgcacagcat
aaattaataaaaatacagggtagtgttggacaaagtgctgttatacacggtgttttagat
aaagatctggctgatgcattaccactagaagaagccctgcaatggttgttcgagcaatgt
aaagataaagtattagtcgcgcatcatgctcaattagatttacaatttctgcaacaatca
ttatcaaaatccggagcacattccttttctatgttagccatagataccttaatcattgag
aaggagcgggaactgcgcaagcaccaggttttaaaaacagggagtttacgtttgaacgca
tgtagagatcgttataatttacctatttataatgcacataatgcattaaccgatgcatta
gcttgcgctgaattattattagcgcaattaaatcagatgggtggcttagataatatcact
ttagtgcaattgctcactaagcgataa
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