Psychromonas ingrahamii: Ping_0568
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Entry
Ping_0568 CDS
T00450
Symbol
hepA
Name
(GenBank) RNA polymerase-associated protein HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pin03021
]
Ping_0568 (hepA)
Transcription machinery [BR:
pin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Ping_0568 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Cas3-like_C_2
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
ABM02422
UniProt:
A1SSF7
LinkDB
All DBs
Position
complement(737324..740236)
Genome browser
AA seq
970 aa
AA seq
DB search
MIFSLGQRWISDTESELGLGTIVALEGRMLTVLFAASGEQRLYAIEEAPITRVRFNVGDE
ILSHDDSKLLVSEVVEKDNLITYIGTRVDNGSASELRETFLNNFIKFNKPQDKLFAGQID
KFDRFVLRYKSLTNQHQQQKSKLRGLLGPRVDLIPHQFYIAEEVGKRHAPRVLLADEVGL
GKTIEAGLIIHQQLVTGRAKRILIVLPENLQHQWLVEMMRRFNLHFSIFDDARCNEAYLD
SINPFETEQLVLCSIDLLRKRTHFENALEADWDLLIVDEAHHLIWDKEKPSRDYQVVEAL
SKSIPGILLLTATPEQLGHESHFARLRLLDPNRFFDYQKFIQEEEGYKPVATAINELLDN
NQLSNESKNSITELLREQDVQPLFNIIDDISLENDERQSAQHELISNLLDRHGTGRLLFR
NTRSAIQGFPKRHLKTIALPLPEQYKTAIKVSKMLPSGTLQEQAFRALYPEQIYQAFEGG
ESNSWCSFDPRINWLIDLIQQLKGEKILIIAAQAETALALEEALRTREAIKSAVFHEGLS
LIERDKAAAYFAQTEEGAQVMICSEIGSEGRNFQFAHHLVLFDLPINPDLLEQRIGRLDR
IGQRCDIQIYTPYLKGTSQENLQKWYEQGLQAFTQTTPTGHTIFELVEEDLINLLATGEN
DNGEVDKLIKLTRSHNDKLKKQLEQGRDKLLEINSSGILHNSDLLDDITEIDQKPDFTQF
ALQLFDVVGVQQEDRGNHCLALRPTEHMLTSDFPGLPEEGTTITFNRKTALSRDDVQYLT
WEHPMISGGMEMILSSDTGTTAVAILKNNSLPAATTFLELIYVVETINTENAQLKRFLPT
TPIRLLLDKNAKDLGQNVTFDSFNRQLTPINRHISRKVANTSQPLIHQLIKDSRPTAQKL
MAEIIDQAKHNMQQTLQQEQDRLQALKAVNPNIREEEIQHLRDQQSNFEKILDQTQLKLD
AIRFIVSTQS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgatattttctttaggtcagcgttggattagtgatacagaatccgaattaggattaggc
accattgtcgccttagagggacgtatgttgacagtgttattcgcagcttcaggtgagcag
cgtttgtatgctattgaagaagcgcctattacacgtgttcgttttaatgtcggggatgaa
attcttagccatgacgactcgaaattattggtcagtgaagtcgtcgaaaaggataactta
ataacctatataggaacacgtgtagataatggttcagcaagcgaattaagagaaacgttc
ctaaataatttcatcaaatttaataaaccgcaggataaactgtttgccggtcagattgat
aaatttgatcgttttgtgctgcgttataaatccttaaccaatcaacaccagcaacaaaaa
tctaaactgcgtggtttattaggcccgcgggtagatcttattccccaccagttttatata
gcagaagaagtgggtaagcgtcatgcccctcgtgttttattggccgatgaagtgggtctt
ggtaaaactattgaagcgggtttaattatccaccagcaattagtgaccggtcgcgctaaa
cgtatcttaattgttttacctgaaaatttacagcatcagtggttggtcgaaatgatgcga
cgttttaatttacattttagtattttcgatgatgcacgttgtaatgaagcttatcttgat
tcgattaacccctttgaaactgaacaattagtcctgtgcagtattgatttattacgtaaa
agaacccatttcgaaaatgcattagaagcggattgggatttactgatcgttgatgaagca
catcaccttatctgggataaagaaaaaccaagtcgcgactatcaggttgttgaagcctta
tcaaaaagtattcccggcattttattactgacagccacacctgagcaactgggtcacgag
agccattttgcacgtttgcgtttattagatccaaatcgtttctttgattaccaaaaattt
atccaggaagaagaaggttacaagcccgttgcgacagcaattaatgaactgctggacaac
aatcaattatccaatgaatcaaagaacagtattacagaactgctccgcgaacaggatgtg
cagcccctgtttaatattattgatgatatttctcttgaaaatgacgaacgtcagtccgca
cagcatgaattgataagtaacttgttagacagacatggcaccgggcgcttattattccgt
aatacccgttcggctattcaaggcttcccaaaacgtcatttaaaaaccattgccctgcct
ttgcctgagcaatataaaaccgcgattaaagtatctaaaatgttgccttccggcacactt
caagaacaagcctttcgggctctttatcctgaacagatttatcaagcctttgaagggggt
gaaagcaattcctggtgttcattcgatccacgcataaattggttaattgatcttattcag
cagttaaaaggggaaaagatcttaattattgcagcacaagctgaaaccgcattagcactt
gaagaggcattacgcacgcgtgaagccattaaatcggctgttttccatgaaggtttatca
ttaattgaacgtgataaagcggccgcttattttgcccaaactgaagagggtgcgcaggtg
atgatttgttctgaaattggttcagaggggcgtaacttccaatttgcccatcacctggta
ttatttgacctgccgatcaacccggatctgcttgagcagcgtattggccgcttagacagg
ataggccaacgttgcgacattcaaatctataccccgtatttaaagggtacatcacaggaa
aacctgcaaaagtggtatgaacaaggtctgcaagccttcacgcagacgactcctacgggc
cacactatctttgagttagttgaagaggatttaattaatttactggcaacgggtgaaaac
gataatggtgaagtagataaacttattaagctgacacgcagtcataacgacaagcttaaa
aagcagcttgaacaaggccgtgacaaattattagaaatcaactccagtggtattctacat
aacagtgatctgcttgatgatattacggaaatcgatcagaaaccggatttcacccagttt
gctttgcagctctttgatgtggtgggtgtacagcaggaagaccggggtaatcactgttta
gcgctccgccctaccgagcatatgctgaccagcgattttccgggattaccggaagaaggg
acaaccatcacctttaacagaaaaaccgcattaagtcgtgatgatgtgcagtatttaacc
tgggagcatcccatgataagcggcggtatggaaatgatcttaagctcagataccggtaca
accgcggtggccattttaaaaaacaattcattacccgctgcgacaacatttttagaatta
atctatgtcgtagaaacaatcaatacagaaaatgcacaattaaaacgtttcttacccaca
acccctattcgtttgttattggataaaaatgcaaaagatttaggacagaatgtcaccttt
gatagctttaatcgccagttaactcccattaaccgccatatcagtcgtaaagtcgccaat
acctcacagcctttaattcatcaattgattaaagactcacggccaacagcacaaaaacta
atggctgaaattattgatcaggcaaaacacaatatgcagcagacattacagcaggaacaa
gatcgtctgcaggcattaaaagcggtcaatccaaatatccgcgaagaagagatccagcac
ctacgggatcagcaaagcaacttcgaaaagatattagatcaaacccaattaaaattagat
gccatccgatttattgtttcaacacaatcctag
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