Psychromonas ingrahamii: Ping_0816
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Entry
Ping_0816 CDS
T00450
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pin03021
]
Ping_0816
03009 Ribosome biogenesis [BR:
pin03009
]
Ping_0816
Transcription machinery [BR:
pin03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Ping_0816
Ribosome biogenesis [BR:
pin03009
]
Prokaryotic type
rRNA transcription factors
Ping_0816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
DUF4332
KH_KhpA-B
S1
KH_2
Motif
Other DBs
NCBI-ProteinID:
ABM02659
UniProt:
A1ST44
LinkDB
All DBs
Position
1018934..1020433
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVVEAVSNEKGLPREAIFQALESALAIATKKKYENDIEVRVEIDRESGKFDTFR
RWLVLEPDAKMENPCKEMTFEAAEYETPEIKVGDYIEDEIESVTFDRITTQTAKQVIVQK
VREAERAQVVAQYAEQEGELITGIVKRMNRDNILLDLGGNAEAVIFRDEMLPRENFRPGD
RLRGLLFAVRPEARGAQLFVTRTQPEMLIELFRLEVPEIAEEMIDLMGAARDPGSRAKIA
VKSNDKRIDPVGACVGMRGARVQAVSSELGGERVDIILWDENPAQYAINAMSPADVVSVV
IDEDAHSMDIAVEEDNLAQAIGRNGQNVRLASQLTGWELNVMTVVQLREKHQAEAASVIS
VFTEALEIDEEFAAVLVEEGFSSLEEIAYVPLNELLAIDGLDEALIDELRVRAKDFLATK
ALVDEEGLEDTKPADDLLALEGLEGHLAYVLASKGIITLENLAEQAVDDLLEIEELNEAK
AGELIMAARNICWFSEDAE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaattttacttgtagtagaggcggtctctaatgaaaaaggacttccacgt
gaagctatttttcaagctttagaaagcgcactagcgatcgcaactaaaaagaaatatgaa
aacgatatcgaagtacgtgttgaaatcgaccgtgaatcgggtaaatttgatacttttcgt
cgttggttagtgctagaacccgatgctaagatggaaaacccgtgtaaagaaatgactttt
gaggcggctgaatatgaaacgccggaaattaaagttggcgactatatagaagatgaaatt
gagtcggtaacctttgatcggatcaccacacaaactgccaaacaagtgattgtacaaaaa
gtacgcgaagctgaacgtgctcaagttgtcgcgcagtacgccgagcaagaaggcgagcta
atcaccggtattgttaagcgtatgaatcgcgataatattttattggacttaggcggtaac
gctgaagccgttatcttccgtgatgaaatgttaccccgcgaaaatttccgtccgggcgat
cgtctgcgcggccttttatttgcagttcgacctgaggcgcgaggcgcacaacttttcgtg
acccgtacacaacctgaaatgctgattgaacttttccggttagaagtgcctgaaatcgca
gaagagatgattgatcttatgggtgctgcccgagatcctggttcgcgtgcaaaaattgct
gtgaaatcaaatgataaacgtattgatcctgttggtgcttgtgttggtatgcgcggtgcg
cgtgtacaagctgtttcaagcgaattaggtggcgagcgtgttgatatcattttgtgggat
gaaaatcctgcgcaatatgccatcaacgcaatgtcgcctgccgatgttgtttcggttgtg
attgatgaagatgctcacagcatggacattgctgttgaagaagataatttagcacaagcg
attgggcgtaatggtcaaaatgtgcgtctggcatctcaacttacgggttgggaactgaat
gtaatgaccgtggtacaattgcgcgaaaaacatcaagctgaggctgcgagcgtgatcagt
gtctttactgaagcacttgagattgatgaagagttcgctgctgttttggtggaagagggt
ttcagttcattagaagaaattgcttatgttccactgaatgaattattggctattgatggt
ttagatgaagcgcttattgatgagttacgtgtccgtgcgaaagactttttagccactaaa
gcactggtagatgaagaaggcctagaagatacaaaaccagcagatgatcttctagcgctt
gagggtttagagggtcatttagcatatgtgctagcaagcaaaggtattattacccttgaa
aatcttgccgagcaagctgttgatgatttacttgaaattgaagaactaaacgaagcaaaa
gcaggggagctgatcatggctgctcgtaacatctgttggttcagcgaagacgctgaataa
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