Psychromonas ingrahamii: Ping_0968
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Entry
Ping_0968 CDS
T00450
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03030
DNA replication
pin03430
Mismatch repair
pin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ping_0968
03430 Mismatch repair
Ping_0968
03440 Homologous recombination
Ping_0968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pin03032
]
Ping_0968
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_0968
Enzymes [BR:
pin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ping_0968
DNA replication proteins [BR:
pin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ping_0968
DNA repair and recombination proteins [BR:
pin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ping_0968
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
CAF1
CBM27
Motif
Other DBs
NCBI-ProteinID:
ABM02808
UniProt:
A1STJ3
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All DBs
Position
1215661..1216377
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AA seq
238 aa
AA seq
DB search
MNNFNDHEILNWAAFLQLKEQLSKDSRLKNFYKTGTYHAETPLSDIDFVALDFETTGLDS
QQNGIISIGLVPFNLQRIFCRKVKEWYINPQDNLQENSIIIHGITHSDLQDAPDILRILE
QLLDELAGKVVVVHYRRIERDFLDHTLRILIDEGILFPVIDTMQIEANLQRRKSQGLFNF
FNKKRPESIRLADSRARYNLPVYPPHDALTDAIATAELLQAQIKYHFSPDTAIKKLWL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttcaatgaccatgagattttaaactgggcagcctttctgcagttaaaagag
cagctcagtaaagattcacgtttgaagaatttttataagacaggaacctatcacgctgaa
acgccattaagtgacattgattttgtcgcactggattttgaaacgacaggcttagattca
cagcaaaacggtattattagcattggtctggtgccctttaatttacagcgtattttttgc
cgaaaagtaaaagaatggtacatcaatccacaggataatttacaagaaaactcgattatt
attcatggtattacccactcggatttacaagatgcacctgatattctgaggattttggag
cagcttttagatgaactggccggaaaagtggtggtggtgcattatcgtcgtattgagcgt
gattttcttgatcacactttacgcattttgattgatgaaggtatactatttccagttatt
gataccatgcagattgaggccaatttgcaacggcgtaaatcgcaggggttgtttaatttc
tttaacaaaaaacgaccagagtcaattcgtcttgccgatagtcgtgctcgttacaactta
cccgtttatccgcctcatgatgccttaactgatgcaattgctactgcggaattactgcag
gctcaaattaaatatcattttagtcctgacactgcgattaaaaaattatggttataa
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