Psychromonas ingrahamii: Ping_1247
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Entry
Ping_1247 CDS
T00450
Name
(GenBank) cell division control protein 48 ATPase of AAA family CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pin
Psychromonas ingrahamii
Pathway
pin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Ping_1247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pin03019
]
Ping_1247
03009 Ribosome biogenesis [BR:
pin03009
]
Ping_1247
04131 Membrane trafficking [BR:
pin04131
]
Ping_1247
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pin04147
]
Ping_1247
Messenger RNA biogenesis [BR:
pin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Ping_1247
Ribosome biogenesis [BR:
pin03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Ping_1247
Membrane trafficking [BR:
pin04131
]
SNARE
SNARE associated proteins
Others
Ping_1247
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Ping_1247
Exosome [BR:
pin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ping_1247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_2
AAA_16
AAA_5
AAA_22
AAA_14
nSTAND3
AAA_33
AAA_18
Rad17
RNA_helicase
NPHP3_N
TIP49
AAA_17
Mg_chelatase
IstB_IS21
AAA_28
NB-ARC
Zeta_toxin
Sigma54_activat
AAA_7
TsaE
Sigma54_activ_2
ATPase_2
ABC_tran
Parvo_NS1
ATPase
AAA_24
NTPase_1
ATP-synt_ab
Molydop_binding
SLFN-g3_helicase
AAA_lid_PRS2_C
ORC-CDC6-like
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
ABM03077
UniProt:
A1SUB2
LinkDB
All DBs
Position
1556826..1559024
Genome browser
AA seq
732 aa
AA seq
DB search
MNEKSTSPLMLQVAEALSKDVGRTYARIGPEDMLRLGLEVGDIVTVNGKRRTVAKVMICY
KPMREQSCIQLDGISRSNAGVGLGDRVEVERIIASPAQRLTLTPVDLAPRKKDLNYIGSL
VDGLVVMEGDRIRVSLFGSRSIDFRVKNVSPKSPVLIGGTTQLTIGDEAEEETSSSSLSY
EDVGGVKPQLARIREMIELPLRYPELFDQLGIDAPKGVLIYGPPGCGKTLIARIIAHETE
ANFFSVSGPEIIHKFYGESEAHLRKIFEEAGRKGPSIIFIDEIDAIAPRRDQVVGEVEKR
VVAQLLALMDGLNSRQNIIVIAATNLPNLLDPALRRPGRFDREICIPIPDRDGRLQILEI
HTRGMPLADDVKMNHLADVTHGFVGADLEALCREAAMSVLREILPSINLSLASIPCEQLA
KLHVGMADFLVALREVEPSAIREVFVDIPNVSWDDVGGLSDIKQQLIEAIEWPLKYPELF
EQSGVRPPKGLLLCGPPGVGKTLIAKAVANESGVNVISVKGPALISKYVGESERGVREVF
HKARQAAPCIIFFDEIDALVPLRGSGGSDSHVADRVLSQFLAEMDGIDDLKGVFIFGATN
RRDLIDPAMLRPGRFDQIVNIPLPDTEGRTEIFAVHLRDKPLAEGIEAQNLAERTSGYSS
AEIAALCNRSALRAIRRVVDTAGGDPTKGLNVLIELEDFEFTLAEMGIKTQDLTCNQPQI
NSTESQSNVYEE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaaagcacatcaccccttatgcttcaagttgcagaggcgctaagtaaggat
gttggccgtacttatgcccgtattggaccagaagacatgttacgtttagggcttgaagtc
ggcgatatagtgacggtgaatggaaaacggcgcacagtggccaaagtgatgatttgttac
aaaccgatgcgcgagcagtcttgcattcagttagatggtattagccgaagtaatgctggt
gtaggccttggcgatcgtgttgaggtcgaacggattatcgcttcccccgctcagcgcttg
acactcactccggtcgatctcgctccccgaaaaaaagatcttaactacataggtagtctg
gttgatggcctggttgttatggaaggagatcgtattcgagtttccctttttggcagccgc
tcaatcgattttagagtgaaaaatgtcagtccaaaatctccagtcttgatcggcggtacc
acacagttaacgattggtgatgaagctgaagaggagacgtcgtcatcctcgctatcttat
gaagatgtgggtggggttaaacctcaactggcgcgaatacgagagatgatcgaactgcca
ctgcgctatcctgaattatttgatcaattgggtatcgacgcccctaaaggtgtcctcatt
tatgggccaccgggctgtgggaagacccttattgctcggatcatagcccatgaaaccgaa
gcgaactttttttcggtgagtggccctgaaattattcataaattctatggtgaaagcgaa
gcgcacttgagaaaaattttcgaagaggcggggcgtaagggacccagtattatctttata
gatgaaattgatgccatcgcaccacgtcgagaccaagttgtcggtgaggtggaaaagcgg
gtagtggcacaattactggcactgatggatggcctaaacagtcgccagaacattatcgtc
attgccgccactaatcttcccaatcttctggatccggcgcttcgtcggcccggacgtttt
gatcgtgaaatctgtattcccatcccagatcgtgatggtcgattacaaattcttgagatc
cacactcgtggtatgcccttggccgatgatgtgaaaatgaaccatcttgccgatgtgacc
catggttttgttggtgctgatcttgaagcgctttgtcgtgaagctgcgatgtcggtctta
cgggaaattctcccaagtatcaatttatcccttgccagtatcccttgcgagcagctggca
aaattgcatgtgggtatggctgattttcttgtcgcattacgggaagtcgaaccttctgct
atccgtgaggtcttcgtggatattcccaacgtgagctgggatgatgttggtgggttatca
gatataaaacaacagcttattgaagctattgaatggccccttaagtacccagaactcttt
gagcaatccggcgtgcgacctcccaaagggttattactttgcggcccgccgggtgtggga
aagacgctgatcgccaaggcagtcgccaatgaaagtggtgttaatgtgatttctgtcaaa
ggaccagcacttatctctaagtatgttggtgaatctgaaagaggggtgagagaggttttt
cacaaagcccgccaagcggctccctgcattatcttctttgatgaaatcgatgcgctcgtt
ccactgcgtggcagcggagggtcagattcccatgtagcagatcgcgttctcagccagttt
cttgctgaaatggacggcatagacgatctcaaaggcgtgtttatcttcggtgccaccaac
cgccgtgatctgatcgatccagccatgctcagaccgggtcgttttgaccaaattgtcaat
atcccactccccgatactgagggacgtacggaaatttttgctgttcatttgcgagataag
ccattggctgaggggatcgaagcacaaaaccttgctgaacgaacatccggctatagtagt
gctgagatagcagccttgtgtaaccgttcggccttgcgggctattcgccgagtagtcgat
acagcgggtggagatccgaccaagggactcaacgtactgattgaactggaagattttgag
tttaccctagcggaaatggggattaaaacgcaagatttgacctgcaatcagccacaaatt
aattccacagagagtcagagtaacgtttatgaagaatag
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