Psychromonas ingrahamii: Ping_1549
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Entry
Ping_1549 CDS
T00450
Name
(GenBank) deoxyribodipyrimidine photo-lyase family protein (cryptochrome)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_1549
Enzymes [BR:
pin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Ping_1549
DNA repair and recombination proteins [BR:
pin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Ping_1549
Prokaryotic type
Ping_1549
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABM03355
UniProt:
A1SV40
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All DBs
Position
1897530..1899083
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AA seq
517 aa
AA seq
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MAANIAATNIRADSVVNIVWLKRDLRLSDHQPLSESIQSGLTLLYYVFEPLLIADPHYDK
RHWRFIWQSIEDINTQLSAFNAQIYVYFGDAVAGLNEIQQRFNITGLFSHEEVGLLSTFE
RDKAVNKWCKAQNIVWHESASGAVTRGKKNRNNWDKDWRKIMKAELCQPALSCNTLLSKQ
CLERLPQFILPVSWSTPDDFMLKGGELWAQKMLQSFLNGRGKNYHFDISKPQASRKSCSR
LSPYLAWGNISLRQFYQIILMKRPQNGWKRPIDALASRLHWHCHFIQKFESEHQMQWRPV
NRAYSNFSYPDLHCGLSVETRLNKWKTAQTGYPLVDACMLCLIKTGYINFRMRAMLVSFL
CHHLLLDWRLGVSYLAKLFLDFEPGIHYPQFQMQSGVTGTNIIRVYNPVKQSLEKDKDGL
FIRTWLPQLSELPNEIIHTPWQLSPMEQQLYQCQLGETYPLPIVDINETGKIARDLLWGF
RKRFDSKKEGQRIVAKHVRATKKPTKARKPKPLEKLI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaatatcgcggcaactaatatccgggcagatagtgttgtcaatattgtttgg
ttaaagcgtgacctgcggcttagcgatcatcagccgctgagcgaatcaattcagtcgggt
ttaactctattgtattacgtttttgagcctttattaatagcagatcctcattacgacaaa
cgacattggcgttttatttggcaatcaattgaagatattaacactcagctcagcgctttt
aatgcccagatttatgtttattttggtgatgcggttgccggccttaatgaaattcagcag
cgctttaacattaccggtttatttagccatgaagaagtcggcttattgtctacttttgag
cgcgataaagcggttaacaaatggtgtaaagcacaaaacattgtttggcatgaaagtgca
tcaggagcggtaactcgcggtaaaaaaaatagaaataattgggacaaagattggcgtaag
ataatgaaagctgagttatgtcagccagcgttgtcttgtaacacactgctaagtaagcaa
tgtttagagcggttacctcagtttattttacctgtgtcgtggtcaacacctgacgatttt
atgttaaaaggtggtgagctttgggcgcaaaaaatgctgcagtcatttttgaatggccga
ggtaaaaactatcattttgacatatccaaaccgcaggcaagtcgtaaaagttgttcacgg
ttatcgccttatttagcttggggcaatataagcttaaggcagttctatcaaatcatttta
atgaaaagaccacaaaacggttggaaacgaccgatagatgcactggcatctcggctgcat
tggcattgccattttatacaaaaatttgaaagcgaacatcaaatgcagtggcgtccggta
aatcgagcttacagtaattttagctatcctgaccttcactgtggtttgagtgttgaaacg
cgattaaataaatggaaaacggcgcaaacaggctatccgctagttgatgcttgcatgctt
tgtttaataaaaacagggtatataaattttcgcatgcgcgcgatgttagtcagttttttg
tgccatcatttactgctagattggcgtttaggcgttagttatttagcgaaattatttctc
gattttgagccaggaattcactatccacaatttcaaatgcagtcaggggtaactggcact
aatatcattcgggtttataatccagtgaaacagtcattggaaaaagataaagatggtcta
tttattagaacatggttgccacaattatcagagttgccaaatgaaattattcatacccct
tggcaattatcgccaatggagcaacagctttatcaatgtcaattaggtgagacttatcct
ttacctatcgtggatatcaacgaaacaggtaagattgcccgcgatttactctggggtttt
agaaagcgatttgacagtaaaaaagaaggtcagcgcattgtagcaaaacatgttcgagcg
actaaaaaaccgacgaaagcaagaaagcctaaaccattagaaaagttaatatga
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