Psychromonas ingrahamii: Ping_2238
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Entry
Ping_2238 CDS
T00450
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ping_2238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_2238
Enzymes [BR:
pin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Ping_2238
DNA repair and recombination proteins [BR:
pin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Ping_2238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TACC_C
DUF6353
SMBP
Motif
Other DBs
NCBI-ProteinID:
ABM03979
UniProt:
A1SWW4
LinkDB
All DBs
Position
2721589..2721825
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AA seq
78 aa
AA seq
DB search
MALKKPENMHYEEAIDELENIVNHLEVGDLALEDALKQFERGIALARSNNQKLQKAQQQV
NILMQQDAQAPLQEFNDE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atggccttaaaaaaacccgaaaatatgcattatgaagaagctatcgacgaactagaaaat
attgtcaaccatttagaagtgggtgacttagctttagaggatgctttaaaacaatttgaa
cggggcattgcattagcgcgcagcaacaaccaaaaacttcaaaaagcacagcagcaagtt
aacatcttaatgcaacaagacgctcaggcaccgcttcaagaatttaatgatgagtaa
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