Psychromonas ingrahamii: Ping_2270
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Entry
Ping_2270 CDS
T00450
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pin03016
]
Ping_2270
Enzymes [BR:
pin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Ping_2270
Transfer RNA biogenesis [BR:
pin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Ping_2270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
Motif
Other DBs
NCBI-ProteinID:
ABM04011
UniProt:
A1SWZ6
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All DBs
Position
2756575..2758545
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AA seq
656 aa
AA seq
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MFQNNPLLSQLKKQIQEDIPKRQGKVKATDRGYGFLETDKGKRFFIPPSEMKKVLHGDQI
NAFIRGKGDKSTAEPNQLKKTGSAVFIARLVIKQKNISIIPKNPLLKGFFKIKGSQSLQS
RGYQDGDWVKVELVSHALEGNGFLTQIIEKIADASDPFAYRLLTVATHNLANKAPEFDHP
WKIIDPQLSRSDLTKTPFFTIDGVNTQDMDDALYIEADENGWKLTVAISDPSAYVPENSD
MDAEAKRRAFTLYLPNFNVPMLPRDLSDSLCSLKEGEKRATLCCTIHINKKGEIEGEPAF
YGAWIKSHYRLNYTDVSNYLENEELSNDCWKPSTQLAEQLRTLDSLSLKRLQWRTDNNAV
FKNQPDYTLKLNNKGEISEILCEPRRSANRLVEESMIAANICAGDFLAKHKQQGVFNTHS
GFSSERLGKVVSLLSEFGIESDIQTLATVTGYTKIRQQTNLLHNSYLDHRLRKLLSYADI
KNTPEAHFTLGVDHYATWTSPIRKYGDLLNHRLIKSVLLKEDNIQIDNEIGQVLNAARKL
QRLAERDVNNILYSQYLKNQVESKWRYKAEIFDIIKAGIRVKIQENGATFFIPCSLLCKD
SSDATKIDCNQALGKVIIAQQTELQLGDVIDVMLNNVKVESGQLIGKLAESLTISE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaacaatccgttgctaagtcaattaaaaaaacaaattcaagaagatattccc
aaacgtcagggaaaggttaaagcaactgatcgtggttatggctttttagaaacagataaa
ggtaaacgtttttttatcccgccaagtgagatgaaaaaagtattacacggcgatcaaatt
aatgcatttattcgtggtaaaggtgataaatcaactgcggagccaaatcaactcaaaaaa
acaggttcagctgtttttattgcacggttagttatcaagcaaaaaaatatctctattatt
ccaaaaaatcccctgcttaaaggattttttaaaataaaaggcagccaatctttgcaatcc
agaggatatcaagatggtgattgggttaaagttgaattagtaagccatgcgctcgaagga
aatggttttttaactcagattatcgaaaaaatagccgatgccagtgatccttttgcctat
cgtttattaaccgtcgcaactcataacctagccaacaaagcccctgaatttgatcatcca
tggaaaattattgatccacaattatcccgtagcgatttaactaaaacccccttttttact
attgatggtgttaacacccaagatatggacgatgcactgtacatcgaagctgatgagaat
ggttggaaattgaccgtcgcgatctcagatccatccgcctacgtaccagaaaatagcgac
atggatgctgaagctaaacgtcgtgcctttacgttatatctacctaattttaatgtgccc
atgttgccgcgtgatttgagtgacagtctttgctcattaaaagagggcgaaaaacgggca
acactctgctgtactatccatattaataaaaagggtgaaattgagggtgaacccgcattt
tatggcgcatggataaaatctcattatcgccttaactatacggatgtttccaattatctc
gaaaatgaagagctcagcaatgattgttggaaacccagtacacaacttgccgagcaactg
cgcactttggattcgctctccctaaagcgtctacaatggcgaactgataataatgctgtc
tttaaaaaccaacctgattacaccttaaaactaaacaataaaggtgagatttccgaaata
ctctgcgaaccaaggcgcagtgctaatcgcctggtagaggaatcgatgattgccgccaat
atatgtgcaggtgactttttagcaaaacataaacagcaaggtgtgtttaatacccattca
ggtttttccagtgagcgcctgggaaaagtagtctctttactgagtgagtttggcattgaa
agtgatattcaaacattagccaccgttacaggttatacaaaaatacgccaacaaacgaat
ttattgcacaacagttatctggaccacagattgcgtaaactgctcagttatgccgatatt
aaaaacacaccagaagcacattttacccttggggtcgaccactacgcgacgtggacttct
cctatccgcaagtacggtgatttacttaaccatcgtttgattaaatcagtgttgttaaaa
gaagataatattcagatcgataatgagatcgggcaggtgcttaatgcagcccgtaaatta
caacgtttagccgaaagagatgttaataatattctttacagtcaatatctaaagaatcag
gtagagtccaagtggcgctataaagcggagatttttgatattattaaagcgggtatccgg
gtcaaaatacaagaaaatggggcgactttctttatcccttgctcactactgtgcaaagac
agcagcgatgccacaaaaatcgactgcaatcaagcattaggaaaagttattattgcacaa
caaaccgaattacaactcggggatgtgattgatgtgatgcttaataatgtcaaagtggaa
agcggtcaattaatcggaaagcttgccgaatcattgacaattagcgagtaa
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