Psychromonas ingrahamii: Ping_2436
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Entry
Ping_2436 CDS
T00450
Name
(GenBank) Exodeoxyribonuclease I subunit C
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Ping_2436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_2436
Enzymes [BR:
pin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Ping_2436
DNA repair and recombination proteins [BR:
pin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Ping_2436
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ping_2436
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ping_2436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABM04167
UniProt:
A1SXF2
LinkDB
All DBs
Position
2984434..2985894
Genome browser
AA seq
486 aa
AA seq
DB search
MSNSAQETTQKNTGDQPTLYWHDYETFGLNPGTDRPAQFAGIRTDLDLNIISEPDEWYCR
PPNDYLPNPEACLITGITPQRALQKGMVESEFIALINQRFSQKNTCVVGYNNIRFDDEIT
RFTLYRNFRDPYQREWKNGCSRWDIIDLVRACYALRPEGINWPVDENDAPSFRLELLTKE
NGLAHQQAHDAMSDVYATIAMAKLIKETHPKLYDYFFGLRKKNNVMAQLKLGSNTPVVHV
SGMFPALQGCASYVMPITQHPSNKNAVIVVDLNKDLSGLATLSIEQIQTYLYTPSIDLPE
GIERPAIKLIHINKCPIIAPAKTLTEERADQLGIDRKQCRRSLDFLSNQPELAEKLQKVF
IQETPSTENKSVEEMLYSGGFLSAADKALSEEVCNSTWPALGNKEFNFEDDRLGILLWHY
RARNAPDSLDVAEQEKWARHRQNYLLENSEAYIEKLEALALENQSNPEKIELLKQLYDYL
NYLNYE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcagcacaagaaacaacacaaaaaaacaccggcgatcagcctacgttatac
tggcacgattatgaaacctttggacttaatcctggaacagatcgccctgctcaatttgcc
ggtattcgtaccgatctcgatttaaatattatctctgaacctgatgaatggtactgccga
ccgcccaatgactaccttccaaatcctgaagcctgcttaattaccgggatcacaccacaa
cgtgcattacaaaaaggcatggtagaaagtgagtttattgcgcttattaatcaacggttc
agccagaaaaacacctgtgttgtgggttataacaatatacgttttgatgatgaaataacg
cgctttacgctgtatcgaaattttcgcgatccttatcagcgtgaatggaaaaatggctgt
tcgcgctgggatattatcgatctggtaagagcttgttatgctttgcgtcctgagggtata
aattggcccgtcgatgagaatgatgcaccctcctttcgtttagagttgttaaccaaagaa
aatggcctcgcgcaccaacaagcgcatgatgcaatgtcagatgtttatgccaccattgcc
atggcaaagttaataaaagaaacacatcctaagctctatgattatttctttggcctgcgt
aaaaaaaataatgttatggcgcaacttaaactggggagtaatacacccgtagtgcatgtt
tcgggaatgtttccagccctccaaggctgcgcatcctacgtgatgcctatcacgcaacat
ccttctaataaaaatgccgttatagtcgttgatttaaataaagatttaagcgggttagca
acactttcgatagaacaaatacaaacctacttatatacccccagtattgatttaccggaa
ggcattgaacgacccgccataaaattaatccatattaataaatgtcctattattgcaccg
gcaaaaacattaaccgaggaacgtgccgatcaattggggattgatcgaaaacaatgtcga
cgttcattagattttttaagtaaccagccagaacttgcagaaaaactacaaaaggttttt
atacaggaaacgccgagtacggaaaataaatccgtggaggagatgttatatagcggagga
ttcttgtctgcggcagacaaagcgctaagcgaagaagtttgtaacagcacttggccagcg
ttaggtaataaagaattcaactttgaagacgaccgattaggcatactattatggcattac
agggccagaaatgcaccagattcattggatgtagcagagcaggagaaatgggcaaggcac
cgccaaaattatttattagaaaacagtgaagcctatattgaaaaacttgaagcgcttgca
cttgaaaatcagagcaatccggaaaaaatagaattattgaagcaactatatgattatttg
aattatttaaactatgaataa
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