Psychromonas ingrahamii: Ping_2563
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Entry
Ping_2563 CDS
T00450
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03420
Nucleotide excision repair
pin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ping_2563
03430 Mismatch repair
Ping_2563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_2563
Enzymes [BR:
pin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ping_2563
DNA repair and recombination proteins [BR:
pin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ping_2563
MMR (mismatch excision repair)
Other MMR factors
Ping_2563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
AAA_22
UvrD_C_2
AAA_14
UvrD_C
DUF7588
ATPase_2
DUF2112
Motif
Other DBs
NCBI-ProteinID:
ABM04284
UniProt:
A1SXR9
LinkDB
All DBs
Position
3138207..3139364
Genome browser
AA seq
385 aa
AA seq
DB search
MNNNSLVIAAAGSGKTTLLVKTAIENPNRPILITTYTESNEQEIRDKFVKKVRTVLANVT
IITWFSFLLKHWVRPYQCRLNDSIADERIGFILVNWRSGLKYKNKDGQGVYWSEKDNFKN
YYFTKDFKVYSDKISKFCFEANKASKQAVVNRISALYGMIFIDEVQDLAGFDLELIKLLF
RSKSEVMLVGDPRQVTYKTHHTTKYSDYGNGNIKGFVTSEKTLGKRISCEVDETTLNKSH
RCSQDICDYSSRLYPKFPAVDACQCDDCRKENILHQGVFIVPKRLCSEYLQTYQPMQLRW
NAKSKVDSSYEVMNFGESKGLTIDRVLIYPTKDMVSWIRNPSQPELLKNPTRARLYVALT
RARHSVAIVLDPEENEVLEGAVVYK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaatagtcttgtaattgctgctgcgggatctggtaaaacaacgcttttagtt
aaaaccgcgatagaaaatcctaataggccaattttgattacaacttacactgaatcaaat
gagcaggaaataagagataagtttgttaaaaaagtaagaactgtactagctaatgtcacg
attatcacatggttttcattccttcttaagcattgggttaggccatatcagtgcagacta
aatgactctattgcggatgaaagaattgggtttattctggtcaactggcgctctggcctt
aagtataaaaataaggatggtcaaggagtatactggtcagaaaaagataacttcaagaat
tattacttcactaaagacttcaaggtctactccgataagatatccaagttttgctttgag
gcaaataaggcaagcaagcaggcagtcgttaaccgaatatcagcgctatatggcatgata
tttatagatgaagtgcaagatcttgctgggtttgatttagagttgatcaagcttctattt
aggtcaaaatcagaggtcatgttagttggagatccaagacaagttacctacaagactcac
catacaactaagtattctgactatggaaacggaaatatcaaaggatttgttacatctgaa
aaaacgttgggtaaacggatatcttgcgaagttgatgaaacaacacttaataagtcacat
cgctgttctcaggatatttgtgactactcttctagactctaccctaaatttccagctgtt
gatgcatgtcagtgtgatgactgccgaaaagaaaatatactgcaccaaggggttttcatc
gtccctaagcgcctttgttcggaatacttacagacatatcagccaatgcagcttcgctgg
aatgctaaatctaaagtagattcatcgtatgaagtaatgaactttggtgagtctaaaggc
cttactatagatagagtacttatttacccaaccaaggatatggtgagttggattcgtaat
cctagccaacctgaattactaaagaaccctactcgtgcgagactgtacgtggcgctgact
cgtgcgcgccacagtgtagctatagtgttagaccctgaggaaaatgaagtattggaagga
gctgtggtatataaatag
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