Psychromonas ingrahamii: Ping_2606
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Entry
Ping_2606 CDS
T00450
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin00061
Fatty acid biosynthesis
pin00071
Fatty acid degradation
pin01100
Metabolic pathways
pin01212
Fatty acid metabolism
pin02024
Quorum sensing
pin04146
Peroxisome
Module
pin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ping_2606
00071 Fatty acid degradation
Ping_2606
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Ping_2606
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ping_2606
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pin01004
]
Ping_2606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pin04147
]
Ping_2606
Enzymes [BR:
pin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Ping_2606
Lipid biosynthesis proteins [BR:
pin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Ping_2606
Exosome [BR:
pin04147
]
Exosomal proteins
Exosomal proteins of breast milk
Ping_2606
Exosomal proteins of breast cancer cells
Ping_2606
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF5673
Motif
Other DBs
NCBI-ProteinID:
ABM04325
UniProt:
A1SXW0
LinkDB
All DBs
Position
complement(3199788..3201566)
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AA seq
592 aa
AA seq
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MENYATIPQMIQYVVNTYSNYSALNFKNKGSWETISTEKFSETIRRLALGLHSLGIKEGE
GIGLIANPSPQWVMIDIAIMVNRAISVPMFANISSTHFQFQSKDSNVKYLFVDDEELLAD
AIKPLLHSFTKIISYHPKRSAKNAISFEELLTLGDQLSAKQPNLYSLMRQAVRPKDIATV
IYTSGTTGMPKGVEITHANLISQIRATTQLFPLHSAKDKALTCLPLAHVFERMVIYFYIS
TGTPIFFADDIKKVGELLRQVQPSVITLVPRLLEKVYAKMHARIEEQSTIKKKLMSSAFE
RAISKEPGAHNLLDKIYDKLIYSKLREALGGNLQMVISGGAALSVSMENFFKNIGLNLYQ
GYGLTETSPVLAANYPGNTRYRSVGKIWPGVEIKISDQQEILAKGPNIMKGYHNDPQTTR
ETIDPQGWLHTGDLGFVDQDGYLFINGRKKEIFKTSNGKYVSPIPIEQMLCVSELIDMAA
IMGENKNFVSCLLFPDFENLGAIKKNRGYSDMSKGDFLNSSEVTQEIAALVERVNSQLNE
WEKIRKFKFIKQSIGIETGELTPTMKIRRQVIEQEFSEIINNFYRDQDQEGE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattatgcgactatcccacaaatgattcaatatgttgttaatacgtatagtaat
tattctgccctaaattttaaaaataagggttcttgggaaacgatttccacagaaaaattt
tctgaaaccattcgtcgtcttgccttaggtttgcactcacttggcattaaagagggtgaa
ggtattggccttattgctaatccctctccccaatgggtgatgattgatattgctattatg
gttaatagagcaatttcagtgccgatgtttgcaaatatatcttcaacccattttcagttt
caaagcaaagacagtaatgttaaatatctttttgtggatgatgaggaattattagcggat
gcaataaaacccctgttacactcatttacaaaaattatctcctatcaccctaaacgtagc
gctaaaaatgccattagttttgaggaattgttaaccttaggcgaccagttatctgccaaa
cagccaaatctttattctctaatgaggcaggctgttcgtccaaaggatatagcaactgtt
atttataccagtggtacaaccggaatgcccaaaggagttgaaataacgcatgctaatctg
atttcacaaattagagcgacaacacaactgtttccgctgcattctgcaaaagacaaggca
ttgacttgtttacccttagcccatgtttttgaaagaatggttatttatttttatatatcg
actggtactcccatcttttttgctgatgatattaaaaaagtaggtgaactactcaggcaa
gtccagccctctgttattaccctagtccctcgcctattagaaaaggtttatgcgaaaatg
catgctcgaatagaggaacaatccactatcaaaaaaaagcttatgtcgagtgcatttgaa
agggcgattagcaaggagcctggcgctcataatctgcttgataaaatttatgacaaactg
atttattcaaaattgagagaggctttaggaggaaatttacaaatggtaatcagtggtggg
gcggcgctgagtgtcagtatggaaaactttttcaaaaatattggactcaatctatatcaa
ggttatggtttaaccgaaacgtcaccggttttagcggctaactacccgggtaatacgcgt
tatcgaagcgtgggtaagatttggccgggtgttgaaataaaaatatcagatcagcaggag
attctggctaaaggccctaatattatgaagggttatcacaatgacccgcaaacgactcga
gaaactatcgatccgcagggttggttacatacgggtgacttaggctttgttgatcaagat
gggtatttatttattaacggcagaaagaaagaaatttttaaaacatcaaacggcaagtat
gtcagtcccatccctatcgaacaaatgttatgtgtttccgaacttatcgatatggccgca
atcatgggggaaaataaaaattttgtctcctgcctgctttttcctgattttgaaaacctg
ggcgcgattaaaaaaaaccgtggctatagtgatatgagtaagggcgatttccttaattcg
agtgaagtcacacaggaaattgccgcgcttgttgagcgtgttaacagtcaattaaatgaa
tgggaaaaaattcgtaaatttaaatttataaaacagtcaatcggcatagaaacaggtgag
cttaccccaaccatgaagattagacgtcaggtcattgaacaggaattcagtgaaattatt
aataatttttatagggatcaggatcaagaaggcgagtaa
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