Psychromonas ingrahamii: Ping_2614
Help
Entry
Ping_2614 CDS
T00450
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ping_2614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pin03021
]
Ping_2614
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_2614
Enzymes [BR:
pin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ping_2614
Transcription machinery [BR:
pin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ping_2614
DNA repair and recombination proteins [BR:
pin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ping_2614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ABM04333
UniProt:
A1SXW8
LinkDB
All DBs
Position
3205954..3206940
Genome browser
AA seq
328 aa
AA seq
DB search
MQGFVKDFLKPNLVGIEQINATRAKVTLEPLERGFGHTLGNALRRILLSSMPGAAITEVE
IDGVQNEYSIKEGVQEEILEILLNLKGLAVKLEGKNEVLVSLTKSGAGPVIAADITHDSD
LEIVNPEHVICHLTGNTEISMRIKIELGRGYVPASSRIHSEEDKSANGRLFVDATFSPVE
RIAYSVESARVEQRTNLDKLVIDMETDGTLEPEEAIRQAAMILAGQLDEFVDERIISAPV
EVEEKPEFDPILLRPVNDLELTVRSANCLKAESIYYIGDLVQRTEVELLKMPNLGRKSLT
EIKDDLVSRGLYLGMRLENWPPASLIED
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttttgtaaaagattttctaaaaccgaacttagttggtatcgaacaaataaat
gcaaccagagccaaagtgactctagaaccgttagaacgcggttttggtcatactttaggt
aatgcgctgcgtcgaatcttgttatcatctatgccgggtgcagcaataacagaagtcgaa
attgatggcgtacaaaatgagtacagcatcaaagaaggcgtgcaggaagagatccttgag
atacttctaaaccttaaaggtctagcggttaaacttgaaggtaaaaacgaagttttagtt
agtttaactaaatctggggccggtcctgttattgcagccgatatcactcatgatagtgat
ctcgagatagtcaatccagaacacgtgatctgtcatttaacgggcaatactgaaatcagt
atgcgcattaaaattgaattaggtcgcggctacgtcccagcttcatctcgtattcatagt
gaagaagataagtctgccaatggtcgtctgttcgtcgatgccactttcagccctgttgag
cgtatcgcttacagtgttgaatctgctcgtgttgaacagcgcaccaatttagacaaactt
gtcatcgatatggaaaccgatggtacacttgagccagaagaagcaattcgtcaggcagct
atgattttagctggacaactagacgaatttgttgatgaacgcattataagtgcacctgtt
gaagtagaagaaaaacctgagtttgatcctattctcttacgcccggtgaatgatttagag
ttaactgttcgttctgctaactgtttgaaagcagaatcaatttactatattggtgacttg
gtacaacgcactgaagttgaactgctgaaaatgcctaatttaggccgtaagtcattaact
gaaatcaaagatgaccttgtctcacgtggactgtatctgggtatgcgcctggaaaactgg
ccaccagcaagtcttattgaagattaa
DBGET
integrated database retrieval system
