Psychromonas ingrahamii: Ping_2630
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Entry
Ping_2630 CDS
T00450
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pin03400
]
Ping_2630
DNA repair and recombination proteins [BR:
pin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ping_2630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
DnaB_C
ChlI
RecA
PAXNEB
Rad51
Lon_C
DUF7125
AAA_16
nSTAND3
GvpD_P-loop
AAA
NTPase_1
AAA_19
MCM
ABC_tran
SLFN-g3_helicase
AAA_30
AAA_14
NACHT
AAA_24
Zeta_toxin
AAA_18
T2SSE
SRP54
NPHP3_N
AAA_5
AAA_29
cobW
Viral_helicase1
KAP_NTPase
AAA_11
NB-ARC
KTI12
GvpD_bR2
TsaE
ATPase_2
DUF5906
AAA_17
ATP_bind_1
RuvB_N
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABM04348
UniProt:
A1SXY3
LinkDB
All DBs
Position
3225814..3227226
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AA seq
470 aa
AA seq
DB search
MAKAKTKIAYVCSDCGANYQKWQGQCGECKAWNTITEFREASSTTKSVNAAVTRNKNAGY
TGALSNGVQRISGVQIENATRVSTGLSELDRVLGGGITLGSVVLISGDPGSGKTTLLTKV
AEVMSQSMSTLYVTAEESLSQWAKRGIERLKLNFNEDNFLLSDTDCIEDIVDQCLENNVR
FLIADSIQAFESNQAEGTAGGVTQVKICAKILNRLCKQHGITLILVGQVNKNSQMAGPQT
LKHIIDTAIHIEVNDASVRILRADKNRFGDTEQVGIFQMTEKGMFSVDNPSRLFLSGSEE
HFEGSAISVIKDGARNLLIEIQALATEVEGEKSIRNCIGISYSRLSLITAVLKKHGGIRT
YYDINISLVGGLKMSDSETSTDMAVMAALLSSINSKPVPQDSVFIGEIALTGEIRQIPQI
VPRVREALSHGKKQIYIPAVAYHKSMQQFVKKGQSIHPLKNIKELIEALS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaaacaaaaatcgcatatgtctgcagtgactgtggtgcgaattaccaa
aaatggcaaggccaatgcggcgaatgtaaagcatggaataccattacagaattcagagaa
gcatcgagtacaacaaaatctgtgaatgcggctgtcactcggaataaaaatgcgggttac
acgggcgcgttaagcaatggtgtacaacgaatttcgggcgtgcagattgaaaatgcaaca
cgggtctcaaccggactttcagaattggatcgcgttttgggcgggggcattaccctcggc
tcagtggtccttatcagtggcgatccgggttcaggtaaaacaaccttacttaccaaggta
gcagaagtcatgtcacagagcatgtcaacactctatgtcaccgcagaagaaagccttagc
caatgggctaaacgcggtattgaacgcttaaaactcaattttaacgaagataatttttta
ttatcggacaccgactgcattgaagatatcgtcgatcagtgtctggaaaataatgttcgt
tttttgattgccgattcaattcaagcttttgaatcaaatcaggcggaaggcaccgcaggt
ggggtcactcaggtaaaaatttgtgccaaaattttaaaccgattatgtaaacaacatggt
attacgttaattcttgtcggtcaggtaaataaaaactcgcaaatggccggaccacaaacc
ttaaaacacattattgatactgctatccacatcgaagtcaatgatgcatcggtgcgtata
ttacgcgccgataaaaaccgttttggagatactgaacaggtcggtatttttcagatgaca
gaaaagggcatgttttcggttgataacccaagtcgtcttttcctctcaggcagcgaagaa
catttcgaaggatcagctatctcggtgattaaagatggcgcccgcaatttactgattgaa
atacaagctctggccaccgaagttgaaggcgaaaaatctattcgtaactgtattggtatt
tcctacagtcgtttatccttaatcaccgcagtattaaaaaaacacggcggtattcgtacc
tattatgatattaatattagtttagttggcggtcttaaaatgtccgattcagaaacctca
acggatatggcggtgatggccgcattattaagctcaattaattccaaacctgtccctcaa
gattcggtatttattggggagatagccctgaccggtgaaatacgtcaaataccgcaaatt
gtgccgcgtgtacgcgaagccttgagccacggtaaaaaacagatctatattcccgcagtg
gcttatcataaatcgatgcaacagtttgtcaaaaaaggacaatccattcatccacttaaa
aatattaaagaattaattgaagcattaagttaa
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