Psychromonas ingrahamii: Ping_2724
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Entry
Ping_2724 CDS
T00450
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pin03009
]
Ping_2724
Enzymes [BR:
pin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Ping_2724
Ribosome biogenesis [BR:
pin03009
]
Prokaryotic type
rRNA helicases
Ping_2724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
CMS1
P-loop_SecA
DUF5137
Motif
Other DBs
NCBI-ProteinID:
ABM04434
UniProt:
A1SY69
LinkDB
All DBs
Position
3340516..3341904
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AA seq
462 aa
AA seq
DB search
MSQSPFSTLPLHTDLLHNLESLGYHVMTPIQAQSLPHVLAGKDVIAQGKTGSGKTAAFGL
GLLEKLSVKRFRIQSLILCPTRELADQVGKELRRLARTIHNIKVLTLCGGVPFGPQIGSL
EHGAHIIVGTPGRIEDHLRKGTLRLDDLEVLVLDEADRMLDMGFQASIDAIIDQAPKKRQ
TLLFSATFPEKINNIAKRIMTDPIMVKAESKHDDSVIAQHFYKVENSQDRMIALRLLLQK
YQPESSVVFCNTKKEVQEVADELANRGFSALALHGDLEQKDRDQALIRFANKSASILVAT
DVAARGLDIDNLSAVFNYHIAHDQELHVHRIGRTGRAGNKGLAFSFYSDKEHHKVSVLED
YLDRSISPEQLPLLNLLDKEPQQSNMITIRIDGGKRQKIRPGDIVGALTGENGISGDQVG
KIHVSDNWSYIAVQRDVIKVAFKKLSEGKLKGRTFRVMVVRG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaatcccctttctcaacactaccattacataccgatcttttacataacctagag
tctttaggctatcacgtaatgacccccattcaagcgcaaagtttaccgcatgtactcgca
ggtaaagatgttatcgcacagggtaaaaccggctccggcaaaacagccgcgtttggttta
ggtttgttagaaaaactgagtgttaagcgttttcgtatccaaagtttaattttatgcccg
acacgcgaacttgccgatcaggttggtaaagagctacgcaggcttgcccgcaccattcat
aatattaaagtattaaccttatgtggcggagtgccctttggaccacaaatcggatcactg
gagcatggtgcacatattattgttggtacaccgggacgtatcgaagatcatctgcgcaaa
ggtacactgcgtttggatgatttagaagtattagtcttggatgaagccgaccgcatgtta
gatatgggctttcaagcatcgatcgatgcaatcatagatcaagcccctaaaaagcgccaa
acattattatttagtgccactttcccggaaaaaattaataatatcgccaaacgaattatg
actgatccgatcatggttaaagcagaatctaaacatgatgactcagttattgcccagcat
ttttataaagtagagaatagccaggatcgtatgatagccctgcgcttattattgcaaaag
tatcaaccagaatcatcggtggttttctgcaatactaaaaaagaagtacaggaagtggct
gatgaacttgcaaaccgggggtttagcgcgcttgccctgcacggtgatttagagcaaaaa
gatcgcgaccaggcattaatccgttttgccaataaaagtgcctctattcttgttgcaacc
gatgtggcagcgcgtggtttggatattgataatctcagtgctgtttttaattatcatatc
gcacatgatcaagaactgcatgttcatcgtattggccgtacagggcgggcaggaaacaaa
ggcttagcattctctttttacagtgataaagagcatcacaaagtctctgtattggaggac
tatttagatcgttctatttcaccagaacaactgcctcttttaaatttacttgataaagaa
cctcagcaatcaaacatgataacgattcgaattgatggtggtaaacgtcaaaaaatcaga
ccgggtgatatcgttggcgcattaaccggagaaaatggtattagcggcgatcaagtgggc
aaaatccacgtatcggataactggtcatatattgcagtacagcgcgacgttattaaagtt
gcctttaaaaaattaagcgaaggcaaacttaaaggccgtacctttcgtgtaatggttgtt
cgcggttag
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