Psychromonas ingrahamii: Ping_2791
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Entry
Ping_2791 CDS
T00450
Name
(GenBank) thermosome subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ping_2791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pin03019
]
Ping_2791
03110 Chaperones and folding catalysts [BR:
pin03110
]
Ping_2791
03029 Mitochondrial biogenesis [BR:
pin03029
]
Ping_2791
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pin04147
]
Ping_2791
Enzymes [BR:
pin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ping_2791
Messenger RNA biogenesis [BR:
pin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ping_2791
Chaperones and folding catalysts [BR:
pin03110
]
Heat shock proteins
HSP60 / Chaperonin
Ping_2791
Mitochondrial biogenesis [BR:
pin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ping_2791
Exosome [BR:
pin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ping_2791
Exosomal proteins of other body fluids (saliva and urine)
Ping_2791
Exosomal proteins of breast cancer cells
Ping_2791
Exosomal proteins of colorectal cancer cells
Ping_2791
Exosomal proteins of bladder cancer cells
Ping_2791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABM04498
UniProt:
A1SYD3
LinkDB
All DBs
Position
3433557..3435191
Genome browser
AA seq
544 aa
AA seq
DB search
MSAKAIKFNHHAREKMLKGVNILADSVKVTLGPKGRNVVIAQKYSRPIITKDGVTVAKEI
ELIDPFENMGAQLTKEVAFQASDSAGDGTTTATVLTQAIVNEGVNAISANMNPIDLKKGI
DKCLHYALLELNLLSQNCDNLEKAEQIATISANGEEQIGKLIAQAMERIGTDGVVSVEDA
QGYDDELIFKEGLAFDRGYLSPYFINNHEKSTVELNNPSILLLDDKLTHMEDLLPLLEKL
ANNRNPLLVIAEDINNEVLSRIIGNNMKNNLKVTVIKSPAFGSRRTEILQDLAIYTGGTV
ISPEIGMDLSEVDTDKLGNASKIIITDSNTTIVHGEGDPQLIMQRIKQLNSQLLNSSSEY
DQKKLAERVAKLSGAIAIIKVGAATEVAMKEKKDRVEDALHATKAAIKEGIVPGGGVAYI
RIAQTLASLEGDNPDQSFGIKILLKAMESPLKQIAKNAGNEPVEVLSTIKKQTGNFGFDA
KNDRYGDMMEFGIIDPTKVTRCALEFAASIASLILTTEVMVADMEDNNANHANHDHAHSL
NCSH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaagcgattaaatttaaccaccatgcccgtgagaagatgttaaaaggagtt
aacatcttagccgattcggttaaagtgactttaggtccaaaggggcgaaatgttgttatt
gcccaaaaatacagccgtcccattattactaaagatggggtcaccgttgcgaaagaaatt
gaattaattgacccttttgaaaacatgggtgcccagttgacaaaagaagtcgcctttcag
gcaagtgacagtgctggtgatggcaccacaacagcaactgtattaactcaagctattgtt
aatgaaggtgtgaatgcaatatcagctaatatgaacccgattgatttaaagaaagggatt
gataaatgcttacactatgctctgctcgaattaaatttattatctcaaaattgtgataac
ttagaaaaagccgaacaaattgcgactatttcagccaacggtgaggaacagattggtaaa
ttaattgcacaagcaatggaaagaattggaaccgatggtgttgttagtgtcgaagatgct
caaggatacgatgatgaattgatttttaaagaaggactcgcctttgatcgtggttaccta
tcaccgtattttattaacaatcatgaaaaatcgacagttgaattaaataacccttctatt
ttactacttgatgataaattaacccatatggaggacttacttcctttacttgaaaagtta
gcaaacaatcgtaacccgcttcttgtgattgcagaagacattaacaatgaggttttatcg
cggatcattggtaataatatgaaaaacaatctaaaagtgactgttattaaatcacccgca
ttcggtagcagacggactgagatattacaagatttagctatttataccggtggtacagtt
atttcgcctgagattggcatggatctgtcggaggtggataccgataaactgggtaatgct
tcaaaaattattattacagattcaaacaccactattgttcacggtgaaggcgatccgcaa
cttattatgcaacgaattaaacaattaaattctcaactccttaattcatcttctgaatat
gaccagaaaaaattagccgaacgtgttgctaaattatcgggtgctatcgccatcattaag
gtcggcgctgcgacagaagtcgccatgaaggaaaaaaaggatcgtgttgaagatgccttg
catgcaacaaaagcagccattaaagaaggtattgtaccaggaggcggcgttgcatatata
cgtatagcacaaactctcgcttctcttgagggcgacaatccggatcagagctttggcatt
aaaattttacttaaagccatggaatcgccattaaagcaaattgctaaaaatgctggaaat
gaacctgttgaagtgcttagtacaattaaaaagcaaaccggaaattttggttttgatgca
aaaaacgatcgatatggtgacatgatggagtttggtattattgacccaacaaaagtaaca
cgttgtgctttagagtttgcagcatctatcgcgagtttgattttgacaacagaggtaatg
gttgcagatatggaagacaataacgcaaatcatgcaaatcatgaccatgcccatagttta
aactgcagccactaa
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