Psychromonas ingrahamii: Ping_3175
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Entry
Ping_3175 CDS
T00450
Name
(GenBank) putative GAF sensor protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pin
Psychromonas ingrahamii
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pin03000
]
Ping_3175
Transcription factors [BR:
pin03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ping_3175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_30
AAA_2
AAA_5
Mg_chelatase
AAA_3
HTH_8
HTH_7
AAA_7
PAS_8
AAA
nSTAND3
AAA_14
HTH_22
HTH_23
DUF815
Motif
Other DBs
NCBI-ProteinID:
ABM04863
UniProt:
A1SZE8
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All DBs
Position
3908145..3910034
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AA seq
629 aa
AA seq
DB search
MPTKPVHHRTHETMIVQSWQRCRESGLNHNSTPNIDRLAGGSLSSLLDEHHSLLTTTHNE
VLPYYENLLLNSKSQVMLADHQGYVLQNWGDQRFKRDNQEIFTPGSGWQESTLGTNAIGT
ALKTGNIVQIERDEHFLISNRFMTGSAAPIFGIDREMLGVIDISTDTYLPESHTLGLVKI
MSQAVENQLITSHFKGEYFILRFNTSIENIDSQWSGLIVFDENGLVISANHRAEIMLGCD
LKLVNISQLFMINVSQLVNQPEGFQVPLVTTQQFRVHGIVHKPVQAKPRALDFRAEIKPE
KSARHVSDQHRFQLDELNLGDPVMEKAVAQSKRIIDKNIPILISGETGVGKEVFVKAMHY
SSLRSKQNLITVNCAAIPQELVESELFGYEKGAFTGSSSKGYIGLIRKADKGTLFLDEIG
DMPLNVQARLLRVLQERRVNPLGSTESYPVDFKLVSATNCNLKESVAAGTFRQDLYYRVS
GLNIELPALRHRRDRQKLIQFLLKYYAENKQHTEITERAMDSFNRHPWPGNIRQLVSVIQ
IAQAMSDNEPIDFEHLPDDFFTDMEASENHGETLIVGQENKPLTAATDSNTNNIIALYQS
LNCNISKTAAQLSVSRNTVYKRLRESGFK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaaaaccagtacatcataggacacatgagacgatgatagtgcagtcttggcaa
cgctgtcgagagtccggactgaaccataattcaacgccaaatattgaccgcctagctggt
ggctcgctgtcttcattgcttgatgaacatcatagccttctgacaacaactcataatgaa
gtactgccctattatgaaaacttactgcttaacagtaagagccaggtaatgctcgctgac
catcagggttacgtgcttcaaaattggggcgatcagcgctttaagcgcgataatcaagag
atattcacgcccggtagtggttggcaggaatccacattaggaacaaatgcaattggtact
gcgctgaaaaccggcaacatagtgcagattgagcgggatgaacattttttaatttccaac
cgttttatgaccggatcagccgcccctatttttggtatagaccgcgagatgcttggggta
atcgatatatcaactgatacttacctgcctgaatcacataccttagggctagtaaaaata
atgtcgcaagcagtagagaatcaactgattacctcccactttaagggcgaatattttata
ctgcgctttaataccagcatcgagaatattgatagtcagtggtcaggcttaatcgtattt
gatgaaaatggtttggttatttcagcgaatcaccgggcagaaataatgctcggctgtgat
ttaaaactcgtgaatatctctcagctatttatgattaacgtcagtcagttagtcaaccaa
cccgaaggttttcaggtgcccttagtgaccacgcaacaattcagagtacatgggatagtg
cataagcccgtacaggcaaaaccccgagcattggattttagagccgagattaagcccgag
aaatcagccaggcatgtatcagatcaacacaggtttcagttagatgaacttaaccttggt
gatcccgtgatggagaaagctgtcgctcaaagcaaacgtattattgacaaaaatattcct
attttaatctccggggaaacgggtgtcggcaaagaagtatttgttaaagcgatgcattat
tcaagcctgcgcagcaaacagaatttgattaccgtaaactgtgccgctattccacaggag
ttagttgaatcggaactttttggttatgaaaaaggcgcctttaccggctcaagcagtaaa
ggttatataggactaatccgcaaagccgataaagggacattatttttagatgagattggt
gatatgccactcaatgttcaggcgcgtttattacgggtattgcaggagcgcagggtgaac
cctctgggcagcaccgagtcttatcccgtcgatttcaagcttgtttccgcgaccaactgc
aatcttaaagagtccgtcgcagcaggtaccttccgtcaggatttatattaccgggtaagt
ggtttaaatatagaattacccgcactccgccatcgccgcgaccgccagaaattgatccag
tttctcctgaaatattacgcagaaaataaacagcataccgagatcacagagcgtgccatg
gatagctttaaccggcacccctggccgggtaacattcgtcaattggtcagtgttattcaa
attgcgcaggcaatgtcagataatgaaccgattgactttgagcatctccccgatgatttt
tttactgatatggaagcaagtgaaaatcacggtgagactttaattgtcggacaggaaaac
aaaccattaacagctgcaacggattcgaacaccaacaacataatagctttatatcagtcg
cttaattgtaatatatcaaaaactgcagcacagttatccgtgagcagaaataccgtctat
aaacgcctgcgtgagagtggttttaaataa
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