Psychromonas ingrahamii: Ping_3335
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Entry
Ping_3335 CDS
T00450
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pin
Psychromonas ingrahamii
Pathway
pin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Ping_3335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pin03019
]
Ping_3335
03009 Ribosome biogenesis [BR:
pin03009
]
Ping_3335
Messenger RNA biogenesis [BR:
pin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ping_3335
Ribosome biogenesis [BR:
pin03009
]
Eukaryotic type
Pre-60S particles
RNases
Ping_3335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABM05022
UniProt:
A1SZV7
LinkDB
All DBs
Position
complement(4122992..4123531)
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AA seq
179 aa
AA seq
DB search
MNKNNLVWIDLEMTGLNPDTDKIIEIATIVTDSDLNILAQGPEFVIHQSNQALDAMDEWC
TTQHGKSGLTDRVKASQISCANAEQATLDFLKEWVPAGAAPLCGNSIGQDRRFLVRQMPA
LEAYFHYRNIDVSTIKELGNRWAPEMVNQHKKTGAHTALQDIKESISELQHYQKHFFKF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaataacctggtatggattgatttggagatgaccggtttaaatccagatacg
gataaaataatcgaaatcgccactatcgtgacggacagtgatttaaatatccttgcacaa
ggacctgaatttgttattcatcaaagtaatcaagcacttgatgcgatggatgaatggtgc
acaacgcagcacggtaagtcaggtttaacagatcgtgtgaaggccagtcagattagttgc
gcgaatgccgaacaagcaaccctcgattttttgaaagagtgggtacccgcaggcgccgca
ccgttatgcggtaatagtatcggccaagatcgccgttttttagtacgtcagatgccagcg
ttagaggcttattttcattaccgtaatattgatgtcagtactattaaggaactgggcaac
cgttgggcaccggaaatggttaatcagcataaaaaaaccggcgctcacactgcgcttcaa
gatattaaagaatcaatttctgaattacagcattaccaaaaacatttctttaagttttaa
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