Pediococcus inopinatus: PI20285_00435
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Entry
PI20285_00435 CDS
T05337
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
pio
Pediococcus inopinatus
Pathway
pio02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PI20285_00435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pio02000
]
PI20285_00435
01504 Antimicrobial resistance genes [BR:
pio01504
]
PI20285_00435
Transporters [BR:
pio02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
PI20285_00435
Antimicrobial resistance genes [BR:
pio01504
]
Gene variants
Macrolide resistance genes
Transporters
PI20285_00435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_22
AAA_18
AAA_23
MeaB
AAA_15
TsaE
MMR_HSR1
AAA
RNA_helicase
RsgA_GTPase
DO-GTPase2
Dynamin_N
AAA_33
FtsK_SpoIIIE
nSTAND3
Pox_A32
AAA_16
AAA_28
ABC_tran_Xtn
NB-ARC
AAA_14
AAA_13
SRPRB
ATP-synt_ab
Adeno_IVa2
cobW
Motif
Other DBs
NCBI-ProteinID:
AVK99238
LinkDB
All DBs
Position
89422..90930
Genome browser
AA seq
502 aa
AA seq
DB search
MSKIEIKNLTFGYESQGNLLFDHVNLNLDSNWKLGLIGRNGRGKTTFLKLLQNQLGYQGK
ISSNLAFDYFPQPIANPKQLTFYVLNDLGVDEQWQVERELSLLGTDPDILWREFTGLSGG
EQTKVLLASLFTQGVNFPLIDEPTNHLDIKARDQVAAYLQQKKQGFIVISHDRHFVNQVV
DHTLSIEKSNILMYQGNFAVYEEQKKLSDLHEEMENTKLKKSISRLKQTAAEKAEWSRSK
EGEKLGNPHKKGSGAVYDTGAIGARAARTMKRSLTLKKHMENDIQSKEKLLKNIEYIDPL
TMNFQPSYHERLLTLKGVSLRYQDAKQPLFKPISFDLKKGNRIGIVGPNGSGKSTLIHAL
LGNFLGQISGEIEQPKHLQISYVRQSYEDNQGTLQEFAEQHHLDYQEFLNNLHKLGLERN
VFTTKIEHMSMGQQKKVELAKSLSVPAELYLWDEPLNYLDIYNQEQLETLITSVKPSMII
IEHDREFIEHVTTGVVELKTSN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaattgaaattaaaaatctaacgtttggctatgaaagccaaggaaacctgttg
ttcgatcacgttaacttgaatctggatagcaactggaaattagggctaattgggcgcaat
gggcgcggtaaaacgacttttttgaagttgttgcaaaatcagttaggctatcaaggaaaa
ataagttctaatttagcgtttgattattttccgcaacccatcgctaatcctaagcagctg
acgttttatgtgctaaatgatttgggtgtggacgagcagtggcaagtggaacgcgagttg
agtttgttgggaaccgacccagatattttgtggcgtgaatttaccggtttatctggtggt
gaacaaactaaagtgcttttagccagcttgtttacgcagggagttaattttccactgatt
gatgagccgacgaatcatttggatatcaaagcccgtgatcaagtggcagcttatttgcag
caaaagaagcaaggattcattgtgattagtcacgatcgccattttgtaaatcaggtggtt
gatcacaccctatcgattgagaagtccaatattttaatgtatcaaggaaactttgctgtc
tacgaagaacagaaaaagttatcagatctccatgaagaaatggaaaatacaaaacttaaa
aaaagtatcagtcggctcaaacaaaccgcggccgaaaaagccgaatggtcacgatctaaa
gaaggggaaaaactcggcaatccccataagaaggggagcggagcagtgtatgatacgggt
gcgattggcgcacgggccgcacggactatgaaacgatcgctgaccttgaaaaagcatatg
gaaaatgatattcaatcaaaagaaaagttgttgaaaaatattgaatacattgacccatta
accatgaactttcagcctagttatcatgaacgtttgctaactttaaaaggggtttcactt
cgttatcaggacgccaaacagccgttatttaagccgatttcgtttgatctaaaaaaagga
aatcgaatcggcattgtgggtccaaatggatccggcaaatcaactttaattcacgcgcta
ttaggtaattttttgggtcagattagtggtgaaattgagcaaccaaagcatttgcagata
agttatgtgcggcaatcctatgaagataatcaaggaacccttcaggagtttgctgaacag
caccatttggattatcaagaattcttgaataatttgcataaattgggattggaacgcaat
gtgtttaccaccaaaatcgagcacatgagtatgggccaacagaaaaaggtggaactagca
aaatcgttgtcggtcccagcagaattatacttgtgggatgagccgttaaattatttagat
atctataatcaagaacagttagaaacgctgattacctcggtgaaaccttcgatgataatt
atcgaacatgaccgcgagtttattgaacatgtgacgactggtgtggtggaattgaaaacg
tcaaattag
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