Pediococcus inopinatus: PI20285_01760
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Entry
PI20285_01760 CDS
T05337
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pio
Pediococcus inopinatus
Pathway
pio03420
Nucleotide excision repair
pio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PI20285_01760
03430 Mismatch repair
PI20285_01760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_01760
Enzymes [BR:
pio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PI20285_01760
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PI20285_01760
MMR (mismatch excision repair)
Other MMR factors
PI20285_01760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
Viral_helicase1
UvrD_C
AAA_19
SLFN-g3_helicase
AAA_30
AAA_14
DEAD
AAA_16
NACHT
NPHP3_N
Lectin_N
Motif
Other DBs
NCBI-ProteinID:
AVK99480
LinkDB
All DBs
Position
362529..364823
Genome browser
AA seq
764 aa
AA seq
DB search
MTDSIQKYEQTHLDGVIAKVQEAIKKADKDAKTAETDSKAIDKNFVNEVRINTSSYTGMM
DTAISVRQQQQLLSERQNSWRHASQQLDVLKRLEKRPYFARIDFHEAGEKKDETIYIGLG
SFSDNPDHFLIYDWRAPISSVYYDGELGNVSYETPDGTQEVDVKLKRQFTIEDGKIVTVF
DTNETIGDQMLLKALGNSSDTKMKSIVSTIQKEQNQIIRDTHSDLLFVQGAAGSGKTAAI
LQRVAYLLYRYRGNLTASQVIMFSPNQIFNDYVDQVLPELGEHNMVQMTYYQFTKRRIPN
MEVETLQQRFEGRTDSVSKKIRRLENSLVYFNAVTKYAEHLGSADMKFRNLMFHDKPFAD
QQKIQDIYYGYNENYHLGNRLDATKEALLKSLNQHIGSEVRSKWAEEAVQSLNHEDLEKL
YGGEPKEFDDSDKEFKFLARKLVIQALQPVRNAIVHNRFLNINSQYVHFLKSVPHLVNLE
KAGLTAADWQTYVDETVANFKKHTISLNNTSAYLYLYDLIVGKKGERDMRYVFIDEIQDY
TAFQLAYLKYNYPRAKFTLLGDLNQSIYSNESTSTLLAELSTMFDKEKTRVIQLEKSYRS
TQQITDFTKEILKNGEAIEAFQREGDLPVVSVKASFDLAVKRVQAQMAKNEKDGESTAII
GKSVAECQKITDGLRKQGEKVTLIKTENQRLADGVVVVPSYLAKGLEFDAVIVWDASDAT
YHDEDERQLLYTICSRAMHRLTIVATEKMSRLFDRIDSNLYDLD
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcaattcaaaagtatgaacagacacatcttgacggtgtaattgctaaggtt
caagaggcaattaagaaggctgacaaagatgccaaaactgcagaaacagactctaaagcg
attgataaaaactttgtcaatgaagttcgtataaatacgagctcgtatacaggcatgatg
gacactgcaatttcggtccgtcagcaacaacagttattatctgagcgtcaaaatagttgg
cgacatgcaagtcaacaattagacgtcttgaagcgtcttgaaaagcggccttattttgcg
cgcattgattttcacgaagctggtgaaaaaaaggatgaaacgatctacattggactcggt
tcgttttctgataatccagatcatttcttgatttatgactggcgtgcaccaatctcgagt
gtttattacgatggtgaattaggaaatgtttcttacgaaacgccggatggcacccaagaa
gtggatgtaaaattaaaacgtcaatttactattgaagacggcaaaattgtgacagtattt
gataccaatgaaacgattggggatcagatgctgcttaaagcgcttggtaactcttctgat
accaagatgaagagcattgtttcgaccattcaaaaagaacaaaaccaaattattcgagac
acgcattccgatcttctgtttgtacaaggggcagcgggttctggtaaaacggctgcaatt
ttacaacgggtggcttatctgttgtatcgctatcgaggaaatttaacggcgagccaagtc
attatgttttcaccaaaccaaatttttaacgattacgtggatcaagttttgcctgaactg
ggcgagcataatatggttcagatgacgtattatcaatttacgaaacgccgaatccctaat
atggaagtagagaccctgcagcaacgatttgaaggacggactgattctgtttccaagaaa
attagacgtttagagaatagtttggtttactttaatgccgttacgaaatatgcggaacac
cttggatcagcggatatgaagttccgtaatttgatgtttcatgataaaccatttgcggat
caacaaaagattcaagatatttattacgggtacaacgaaaattatcacttgggcaatcgc
ttagatgcaaccaaggaagctttattaaagtcgctaaatcaacatattggtagcgaggtt
cgttcaaagtgggctgaagaggctgttcagtcgttaaaccatgaagatcttgagaaacta
tatggtggtgaaccaaaagaatttgatgatagtgataaggaattcaaattcttagctcgt
aaattggttatccaagcgctgcaacccgttcgcaatgccattgtgcataaccgttttcta
aatattaattctcagtatgtacactttttaaagagcgttccgcacctggttaatttggaa
aaagccggtttaacagcggccgattggcaaacttatgtggatgagacggttgctaacttt
aagaagcacacgatttcactaaataatacgtctgcatatctctacctttatgatttaatc
gtcggtaaaaaaggcgaacgtgatatgcgttatgtgtttattgatgaaattcaagattac
acggcctttcagctagcttacttaaagtacaactatccacgggctaagttcactttattg
ggtgatttgaaccaatcaatttacagtaatgaaagtacttcaacactattggcggagtta
tccaccatgtttgacaaagaaaaaacgcgtgtgatccaacttgaaaaatcttaccgttcc
acgcaacaaattacagatttcactaaagaaatcttgaaaaatggtgaagcgattgaagcc
tttcagcgcgagggagatttgcccgttgttagtgtgaaggcaagttttgatttagctgtc
aaacgggtccaagcacaaatggcgaaaaatgaaaaagacggcgaatctactgccatcatt
gggaaatccgttgccgagtgtcaaaagattaccgatggtttacgcaaacaaggtgaaaaa
gttaccttaatcaagacagaaaatcagcgcttggccgacggagtggtggtcgtgccttca
tacttggctaaaggacttgagtttgatgcagtaattgtctgggatgcttcagatgcaacg
tatcatgacgaagatgaacgccaattattgtacacgatttgttcacgtgcaatgcaccgt
ttaacaattgtggcgactgaaaagatgtcacgattgttcgatcgaattgattccaatttg
tacgacttggattaa
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