Pediococcus inopinatus: PI20285_03300
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Entry
PI20285_03300 CDS
T05337
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pio
Pediococcus inopinatus
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pio03019
]
PI20285_03300
Messenger RNA biogenesis [BR:
pio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PI20285_03300
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
CDC73_C
Motif
Other DBs
NCBI-ProteinID:
AVK99733
UniProt:
A0ABZ0Q682
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All DBs
Position
642882..643841
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AA seq
319 aa
AA seq
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MDNKKLFDYEVDETLNIFVLIKSAEVRVAKNGKDFLSMVFEDRSGDIGGKFWDASPQDIK
NFVAGKVIFLNGKRENYKGTPQIKILGIRLATETEPNNPNLYTKKAPMNEADMKEEVSKL
LFDITNPNWNRVVRFLLQKYDQQFYTYPAAKTNHHAFQGGLAYHTISILRLAKQVSNQYP
QINRSLLYAGAILHDLGKTIELSGPVSTTYTVEGNLLGHIVIMDGEIVKACQELKISDSS
EDILLLRHMIVSHHGLKEYGSPIEPLLLEAVVLHALDDLDASIQMVTGALGHTKGGTFSE
RLFAMDGRNFYKPLDHKTE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggataataagaagctttttgattatgaagttgatgaaactttaaatatatttgttttg
attaaaagtgctgaggttcgagttgcaaaaaatggaaaagattttctatcaatggtattt
gaagatcgttctggtgatattggtggaaagttttgggatgcaagtccgcaagatattaaa
aattttgtggctggaaaagttatttttttgaacggaaaacgcgaaaattataagggtaca
ccacagattaagattttgggcattcggttggcaacggaaacggagcctaataatcccaat
ttgtataccaaaaaagcgccaatgaatgaagcggatatgaaagaggaagtaagtaagctg
ctctttgatattactaatcccaactggaatagggttgtcagatttttgctccaaaaatat
gatcaacagttttatacttatccagccgcaaaaactaatcatcatgctttccaaggtgga
ttggcttatcacacgatctcaattctaaggttagctaaacaagttagtaatcaatatcct
cagatcaatcgatcgttgttgtatgcgggagctattttgcatgatttgggtaaaacgatt
gagttatctgggccagtttccacaacttatacggtggaaggaaatttgttaggacatatt
gtgatcatggatggcgaaatcgtgaaagcatgccaagaactcaagattagtgacagtagt
gaggatattttattgttacgtcacatgattgtttcccatcatggcttaaaggaatatggg
tcaccaatcgagccactgctccttgaggcagttgttttacatgcgttagacgatttggat
gcttctatccagatggtgactggagcattaggtcatacaaagggtggaacattttctgaa
cggttatttgccatggatggccgtaatttctataaacctctagatcataaaactgaataa
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