Pediococcus inopinatus: PI20285_03360
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Entry
PI20285_03360 CDS
T05337
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pio
Pediococcus inopinatus
Pathway
pio03030
DNA replication
pio03410
Base excision repair
pio03420
Nucleotide excision repair
pio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PI20285_03360
03410 Base excision repair
PI20285_03360
03420 Nucleotide excision repair
PI20285_03360
03440 Homologous recombination
PI20285_03360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pio03032
]
PI20285_03360
03400 DNA repair and recombination proteins [BR:
pio03400
]
PI20285_03360
Enzymes [BR:
pio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PI20285_03360
DNA replication proteins [BR:
pio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PI20285_03360
DNA repair and recombination proteins [BR:
pio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PI20285_03360
NER (nucleotide excision repair)
GGR (global genome repair) factors
PI20285_03360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
BCAS2
Motif
Other DBs
NCBI-ProteinID:
AVK99745
LinkDB
All DBs
Position
653996..656659
Genome browser
AA seq
887 aa
AA seq
DB search
MTRKKLLLIDGNSVAFRAFFALHNALSKFTNQDGLHTNAIYGFNKMLDHILEIVKPTDAL
VAFDAGKTTFRTEMFDNYKGGRSKTPPELSEQMPYLRELLKAYGIKSYELANYEADDIIG
TLSKEAETAGYEVTIVTGDRDLTQLSSEKTTVSVTVKGVSEVEHYTPEHVQEKLGLTPAQ
IIDMKGLAGDTSDNYPGVTKVGEKTAIKLLQQYDSVEGVYEHIDELKASKMKEHLIEDRD
NAFLSKKLATINREAPIAISLADLAYSGKNPATLVDFYERMNFQSFLKQIRSTEGFEAPQ
TMKKIAFTELTTDNLNEVAKLKGEMAFYLEMPEKNYHVSDLVGFGIGREDKWFVSRNVDL
LTTAIFKKLFTDSNNQISVFDLKRTYVGLNRLGVSFTNGKNDILLESYLLDTNDNSNDLG
ALAHRHGYQDIKTDEEVYGTGVKRHIPDDDAEFLTHLAAKLRAIQQLVPQLKSELEQNEQ
IKLYTDIELPIALVLSKMEIAGVRVDTNRLEQMESEFTERLTEIEQTIYNEAGEEFNIKS
TKQLGSILFEKLGLPSSKKTKTGYSTAVSVLEGLRGQAPIIDNILIYRQISKIQSTYVKG
LLKVVHSSDQKVHTTYLQTLTQTGRLSSIDPNLQNIPIRLEEGRKIRQAFVPSADNAQIF
SSDYSQIELRVLAHITGDKNMQAAFKNGEDIHASTAVRIFGLKDASEVTPNIRRQAKAVN
FGIVYGISDYGLSQNIGISRKQAKTFIDTYFQEYPGVKAFMDQIVETARKQGYVETIAHR
RRYLPDINSSNHNQRSFAERTAMNTPIQGSAADIIKIAMIQMQDELEKRQLKTEMLLQVH
DELIFEVPDDELALVKDLVPSIMDSAVKLDVPLKVESAFGKSWYNAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaaaaaaattacttttaatcgatggaaatagtgtggcgttcagagcctttttt
gcgctccataacgcgctaagtaaatttacaaatcaagatgggttacatacaaatgcaata
tatggatttaacaaaatgcttgatcacattttggagattgttaagcccacagatgcgttg
gtggcatttgatgctgggaaaacaacttttcgaaccgaaatgtttgataactataaaggt
ggacgttccaaaactccacccgaactttccgaacaaatgccttatttgcgtgagttgcta
aaggcttatggcattaaatcttatgaactagctaattatgaagcggatgacattatcgga
accctctcaaaagaagcggaaacggctgggtatgaagttacgattgtaaccggagatcgg
gacttaacccaattatctagtgaaaaaacaactgtttctgtaactgtgaagggagttagt
gaagttgagcactatacgccggagcatgtgcaagaaaagcttgggttaacaccagcgcaa
attattgatatgaaaggattggctggtgatacatcagacaattatcccggagttaccaaa
gttggcgaaaaaacggccattaaattattacaacagtacgattctgttgaaggtgtttac
gaacacatcgatgaattaaaagcttccaaaatgaaggaacatttaatcgaagaccgtgat
aatgcctttttaagcaagaaactggctacaattaatcgtgaagcaccaattgcgatttcg
ttggcggatttggcatattcaggtaaaaaccccgcaactttagtggatttttacgaacgg
atgaattttcaatcttttttgaaacaaattcgttcaactgaaggttttgaagccccacag
actatgaaaaaaatcgcttttacagaactaactacagataacttgaatgaggtggctaaa
ttaaagggtgagatggctttttatttggagatgcccgaaaaaaattatcatgtgtcagat
ttagtgggattcggaattggtcgtgaagataagtggtttgtttctagaaatgttgattta
ttaactacggccatatttaaaaaacttttcacggattcaaacaaccaaataagtgtcttc
gatcttaaaaggacctatgtgggattgaaccgcctgggggtatccttcacaaacgggaaa
aatgatattcttttggaatcgtacttgttagataccaatgataattctaacgatcttggt
gctttagctcatcgccatgggtatcaagatattaagacagacgaagaggtttatggaact
ggtgtgaaacgtcatattccagatgacgatgcagaatttttaacacatttagcagccaag
cttcgggctattcagcagttggtaccgcagctaaaaagtgagcttgaacaaaacgaacaa
atcaaattgtataccgatatcgagttaccaattgctttagtcctttccaaaatggaaatt
gcgggcgttcgcgtagataccaatcgtttggaacagatggaaagtgaattcacagaacga
ctgactgaaattgaacaaaccatctacaatgaagccggcgaagaattcaatattaaatct
actaaacaacttggctcaattttatttgaaaaattaggactgccaagttctaaaaaaacg
aaaacaggctattcaaccgcagttagcgttttggaaggtttaagaggacaagccccaatt
attgataatattttaatttaccgacaaatctcaaaaattcaatcaacttacgtaaaggga
ttattgaaagttgttcattcttcagatcaaaaagtgcacacaacctatctccaaaccttg
acgcaaacaggtcgtttatcttcaattgatcctaatttgcaaaacattccgatccgctta
gaggaaggtcgtaaaattcgacaggcatttgttccgagtgcagataatgcgcaaatcttt
tcgtccgattattcccaaattgaattacgggttttagcacacattactggtgacaaaaat
atgcaggcggcatttaaaaatggggaagatattcatgctagtactgcggtccgaattttt
ggtttaaaggatgcatccgaagtgacaccgaatattcggcgccaagcaaaagctgttaat
tttgggatcgtgtatggaattagcgattatggtttatcgcaaaatattggtatttcacga
aagcaagctaaaacctttattgatacttacttccaggaatatccaggggttaaagcattt
atggatcaaatcgttgaaacagctagaaagcaaggctatgtagaaacgattgcgcaccga
cgtcgttatttaccagacattaactctagcaatcataatcaacgttcgtttgctgagaga
acggctatgaacacgccgattcaaggtagtgctgctgatattattaaaattgcaatgatt
caaatgcaagatgagttagagaagcgacagttaaaaaccgaaatgttgctacaggttcat
gatgaactgatctttgaagtgcctgatgatgaattggcgttagttaaggatctagtgcca
agtatcatggattctgcagtgaaattagacgtccctctgaaagtagagagcgcgtttggc
aaaagctggtataacgctaaataa
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